Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6480 |
Symbol | |
ID | 4315384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 1153341 |
End bp | 1154711 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638154324 |
Product | 2,4-diaminobutyrate 4-transaminase |
Protein accession | YP_778358 |
Protein GI | 115361221 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.749773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAT TCCCGTGCGC CAGTGTCCAT CAATCCGCCT CGCAAGCCGG CTCTCCGCGC ATGGAAAAAC TCGAGTATCT GAAGCATGTC GAATCGAAGG CACGGACCTA CGCGACATCT TTCCCACGGC TGTTTACCCA TGCCAAAGGC ATACGCGTAC GCGACTCCGA CGGGCAGGAA TACATCGACT GTCTGTCGAA TGCAGGTACG CTCGCGCTCG GACACAATCA CCCGGAAGTC AATGAGGCCG TCATGCGGTT TCTGTCGTCC GATCAAATGC AGCAGGCACT CGACCTGGCA ACGCCGGCGA AGCACGCGTT CGTCGAGAAG CTTTTCTCGC TCCTGCCCGG GAAGATCGCC GAATCCGGCA AGATCCAGTT TTGCAGCCCC AGCGGCGCGG ATGGCGTCGA AGCGGCTGTC AAGCTGACCA AGCACTATAC GGGCCGCTCG ACGATCATGG CGTTCCACGG CGCCTACCAC GGCATGACGG CCGGCGCACT CGCCGCATCG GGAAATCTCA CGCCCAAATC GGCCGGCGGC AATGGACGCG ACGTTCATTT CCTGCCGTAT CCCTATGTGT TTCGCTGCCC GTTCGGCACC GATGGCTCGG CGACCGATCA ACTCAGCATC AACTACATTC GGACCGTCCT GTCCGATCCC GAGAGCGGGA TAACCAAACC GGCGGCAATC ATCGTCGAAG TCGTGCAAGG CGAAGGGGGC TGCATCCCCG CTTCCGACGC CTGGTTGATC GAATTGCGCG AACTGACGCT TCGGCATGAA ATTCCGTTGA TCGTCGACGA AGTGCAGACC GGGCTCGGTC GAACCGGCGC CCTGTTCGCC ATCGAACATT CCGGCATCCG GCCGGACGTA CTGGTGTTGT CGAAAGCATT CGGCGGCGGC TATCCGTTAT CGGTGGTGGT CTATGACGAG CGCCTGGACA CCTGGCCGCC CGGCGCGCAC GCCGGCACCT TTAGAGGCAA CCAGATTGCG ATGGTGGCCG GCTTGTCGAC CATGCACATC GTCGAACGGG ACGGCCTGTC GGCGCACGCG GACAGAGTGG GCAAACTGCT GGTTGCCGGC CTCGAAGGGT TGGCCGAACG CTTCCCGTGT CTCGGCCAGA TACGCGGCCG CGGCCTGATG ATCGGCGCTG AAGTCGTCAT ACCCGGCACG AACGGCCAAA CCGGCCCGAC CGATGCAGCA CGGGCGAAAG CCATCAAGGC GAACTGCCTG CGAAACGGAC TCGTGATCGA AACCGGCGGC CGCAACGGCG CGGTGCTCAG GTTCCTGCCG CCGCTGGTCG TATCGGAAGC GGATATCCAC GAAATTCTCA ATCGCTTCGA GCATGCCGTG GAAACAGCCT GCCGTGCCTA G
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Protein sequence | MKRFPCASVH QSASQAGSPR MEKLEYLKHV ESKARTYATS FPRLFTHAKG IRVRDSDGQE YIDCLSNAGT LALGHNHPEV NEAVMRFLSS DQMQQALDLA TPAKHAFVEK LFSLLPGKIA ESGKIQFCSP SGADGVEAAV KLTKHYTGRS TIMAFHGAYH GMTAGALAAS GNLTPKSAGG NGRDVHFLPY PYVFRCPFGT DGSATDQLSI NYIRTVLSDP ESGITKPAAI IVEVVQGEGG CIPASDAWLI ELRELTLRHE IPLIVDEVQT GLGRTGALFA IEHSGIRPDV LVLSKAFGGG YPLSVVVYDE RLDTWPPGAH AGTFRGNQIA MVAGLSTMHI VERDGLSAHA DRVGKLLVAG LEGLAERFPC LGQIRGRGLM IGAEVVIPGT NGQTGPTDAA RAKAIKANCL RNGLVIETGG RNGAVLRFLP PLVVSEADIH EILNRFEHAV ETACRA
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