Gene Bamb_6479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6479 
Symbol 
ID4315383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1152264 
End bp1153262 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID638154323 
Producttaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_778357 
Protein GI115361220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCA TGACGGAACG CAAGCTGCTT GCCGAGGGGA GCTCTCCGTG GCTGCTGGAG 
CCTGCGTCGA ACGCACGCGC GAACGGGCAC GATCTCGTGC TGGCGGTGAA CGACAACCGG
GGGGAACTCG AATCCCGGCT TCTGGAACAT GGTGCGCTGC TGTTTCGTGG CTTCGACGTG
TCATCCGTGG GCGGCTTCGA AGCGTTTGCC GACGCGATTT CGGCCCATAA GTCCGACTAC
GTCTATCGTT CCACGCCGCG CACCTCGATC GGCAACGGCA TCTTCACCGC AACCGAGTAT
CCGCCGAGCG AGACGATCGC ACTTCATTGC GAAAACGCGT ATCAACGCAC CTGGCCGCTG
AGAATTGCAT TCTGTTGCCT GACGCCGGCC ACGACCGGCG GCGAAACGCC GATTGCCGAC
ATGCGGGAGG TGAGCCGCAG GATCGGGCCG CGCATCATGG AGCGCTTCGA GGCGAAACGG
GTGCGCTACG TCAGGCACTA CCGGCGGCAT GTCGACATTC CGTGGGAAAC CGTCTTTCAG
ACCGGCGACC GCAGCGAGGT TGCGACCTTC TGCGCGGACA ACGACATCGA ACTCGAATGG
CTCGACGACG ACACGTTACG CACCGTACAG ATCAATCAGG GCGTGGCCTA CCATCCGGTC
ACCCGCGACA GGGTGTTCTT CAATCAGGCA CATCTGTTCC ATATCTCGAA CCTGGAAGCA
TCGCTCGCCA GTTCGATCGT CAGCCTGTTC GGCACTGACC GAATTCCGCG CAACGCGTGC
CATGGCGACG GGAGTCCGTT CGATCTCGCC GACATCGAGC AGATCCGCAA CGCGTTCCGC
GAATGCGCGA TCACGTTTCC ATGGCAACGA GGCGACGTGC TGCTGGTCGA CAACATGCGC
TTCGCGCATG GCCGCAACCC GTTCGAAGGC GAGCGCAAGG TCGTCGTGTC CCTGCTGGAC
CCGTACTCCC CCGACATCGA AGGAATGGCC GGTCGTTAG
 
Protein sequence
MLGMTERKLL AEGSSPWLLE PASNARANGH DLVLAVNDNR GELESRLLEH GALLFRGFDV 
SSVGGFEAFA DAISAHKSDY VYRSTPRTSI GNGIFTATEY PPSETIALHC ENAYQRTWPL
RIAFCCLTPA TTGGETPIAD MREVSRRIGP RIMERFEAKR VRYVRHYRRH VDIPWETVFQ
TGDRSEVATF CADNDIELEW LDDDTLRTVQ INQGVAYHPV TRDRVFFNQA HLFHISNLEA
SLASSIVSLF GTDRIPRNAC HGDGSPFDLA DIEQIRNAFR ECAITFPWQR GDVLLVDNMR
FAHGRNPFEG ERKVVVSLLD PYSPDIEGMA GR