| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6464 |
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| Symbol | |
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| ID | 4315368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1093581 |
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| End bp | 1097960 |
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| Gene Length | 4380 bp |
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| Protein Length | 1459 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154308 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_778342 |
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| Protein GI | 115361205 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGG TCTATCGGCT GGTCTGGAAC CGCACCTTGC GCGCCCCGCA AGTGGTATCC
GAACGCACAC GAGCGTCGCA CGGCGGGATC GACGCCAGCC ATGGCGCCAT GCCTGCGCGC
CGCTGCGCCG CTTCCATCAT TTCCATCGGC ATGTCGCTCG GCCTGGCGGG CACGGCCCTC
CCGGGCTGGG CCGCCACGTG CACTGTCAGC ACCATCGCGA ATTGCAGCGC CCCCGGCGGC
GACGGTATCC CGGACCGCAG CGGCAACGGC GGCAGCGGTA ACGGCGGTGG CGGTGGTGCC
TCTGCGTTGG GCGGAGGCAC CACCACGATT CAGGTTCCTG GCGGGCCCAC GTCGGGCGGG
ACAGGCGGAA CCGGTGCCAT GAACGACAGT GGCCAGAGCG GCCCCGGCGG GGCGCCCGGC
GTAGCGCCCG CCGGCGATGC CGTGATCAAC GGGAACACTC AAGGCGGCGC TGGCCAGGGC
TTCGACGGAT TCAATTTCGC GGGTGGTGGC GGCGGCGGTG GCGCGGGCGT GTATTCCACC
GGCACCGGCG TGACCGTCAA CAACGGCGTG ACGGTGCAGG GCGGCACAGG CGGAAATGGC
GGCGCCGGCA CATCGGGGCC TGCCTCCAAC GGTGGCGGTG GCGGAGGCGG GGGCGGTGCG
CTGGTGATCG TGACGCCGGC GGCCGATGTG ACGAACCGCG GCACGCTCAT TGGCGGAAAT
GGCGGCAACG GGGGAGGCGG CGGAAACCCC GGGGGCGGCG GTGGTGGCGG CGACGGGCTG
CTGACCGTGG GACCGGGTTC GCAGGTGACC AACCTTGGGA CGATCGTGGG TGGCGTGGGC
GGTGCCGCTG GCGGTGGCGG AAGCACGGCC GGCGCCAGCG GCGCAGGCGT CAACCTGGGC
GGTGGCTTCA CCGTGCTGTC CAACGTCGGC GCGATCACGG GCGGTGCCGG CAACGGCGGG
GCCGCGGGAG CGGGTGTCAT CGCCAATGGC GGCGATGTCA TCGTCAACGG CGGCACGATT
GCGGGCGGCC TGTTCGCGGA TGGCGTGACG CGCGCGGCAG CCATCCGGTT CAACGGAGCG
AACGATACGC TGCAGTTGGT CGGCGGGTCC AACATCATCG GTGACCTCGA CGTGGCAGCG
GGTGCGTCGG CCACCATCAC CGCGGGCACG CCGGGGCTTG CACTGTCCAA CCACATCACG
CTCGGCGATG TCGCGTCCCG CGTGACCTTG AACTCAAACA CGACCGATCT CGCGGTTTCA
GGCGTCATAT CGGGGACGGG CAACGTGGCC GTGAGCGGCA GCCACACGAT CACGCTGACG
GGTGACAGCA CCTATACCGG CGGCACCACG ATCAGCGCCG GCACGCTGCA GATCGGCAAT
GGCGGAGCCA CCGGCTCCGT CGTCGGCGAC ATCGTCAACA ACGGCACGCT GGCTTTCAAC
CGCAGCGACA CGGTGTCGTA TGGCGGCACC ATCAGCGGGA CGGGCAGCCT CGTGCAGGCG
GGTACCGGCA CGCTGGCGAT AGCCGGCGCC GCCGGCTATG CGGGGAGCAC CACCGTCAAT
GCGGGCACGC TCGCGCTGAT CGGCGCGGGC AGCATTGCTG CTTCCAGTGG GGTTATCAAC
AACGGCACGT TCGATATCTC GGGGACTACC TCCGGGGCGA CGATCAATGC GCTGACTGGC
ACGGGCACGG TTGCGCTGGG CGGCCAGACG CTGACGCTGG CCAATGCGGC CGGCACGTTC
GGCGGAACCA TCGGCGGTAC GGGTGCGGTG ACCGTCGGCG GCGGTACGCA AACGCTGTCG
GCGGTGAACA CCTACACGGG CGTCACCACC GTCAATGCCG GCACGCTCGC GTTGACCGGC
GCGGGCAGCA TTGCTGCTTC CAGCGGGGTC GTCAACAACG GCACGTTCGA TATCTCGGGG
ACTACCTCAG GGGCCACGAT CAATGCGCTT ACCGGCACGG GCACGGTTGC GTTGGGCGGC
CGGACGCTGA CGCTGGCCAA TGCGGCCGGC ACGTTCGCCG GAACCATCGG CGGTACGGGT
GCAGTGATCG TCGGCGGCGG TACGCAAACG CTGTCCGGGG CGAACACCTA CACGGGTGTC
ACCGCTGTCA ATGCCGGTAC GTTGGCATTG ATCGGCGCGG GCAGCATTGC CACTTCCAGC
GGGGTCGTCA ACAACGGCAT GTTCGATATC TCGGGGACCA CCGCAGGGGC CATGATCAAT
GCGCTGACGG GCACGGGCAC GGTTGCGCTG GGCGACCAGA CGCTGACGCT GGCCAATGCG
ACCGGCACGT TCAGTGGTGC CATTGGCGGC ACCGGCGGGC TCACTGTTGC GGGCGGCACG
CAGAACCTGT CGGGCGCCAA CGGTTATACC GGCGCAACAT CGATCAGCGC CGGCACGCTC
GCGCTGTCAG GCGCCGGCAG CATTGCCAAC TCCAGCGGCG TCATCAACAA CGGCACGTTC
GACATTTCCG GGACGACCTC CGGCGCAACC GTCAACGCGC TGACTGGCAC GGGCACGGTC
GCGCTGGGCG GCCGCACGCT GACGCTGGCC AATGCGTCCG GCACGTTCAG TGGCGCCATC
GGCGGCACCG GCGGGCTCAC CGTGGCGGGC GGCACGCAGA CGCTGTCCGG CGTGAACACT
TATACCGGGG CGACGATGGT CAACGCGGGC ACGCTCGCGT TGTCGGGTGC CGGCCGGCTT
GCCTCTTCCA CGTCGGTCAC GCTGGCCGGC GCAACGGCCG CGCTCGATCT GTCCGCCGGC
GGCAGCCAGA CGGTCGCGCA TCTCTCCGGC GTGGCAGGCA GCCGCGTGGT GCTCGGCGGC
AATGCGCTCA CGCTGTCGGA CGACTCGTCG CAAACATTCA GCGGCAGCCT CAGCGGCACC
GGCGGTTTGG TCAAACAGGG CGCGGGCACG CTGACGCTGA ACGGTGTCAG CAGCGCGTTC
TCCGGGACGA CGACGGTGGC TGGCGGCACG TTGGCCGTGG GCGACGCGGC TAATGCCGGT
GCGGTGTTGG GCGGCAATGT TGTGGTGAAC TCGCTTGGCA CGTTGCGCGG CCACGGCACG
GTATCGGGCG ACGTCAGCAG CAGCGGCGTG GTCGCGCCGG GCGGCTCCAT CGGAACGCTG
TCCGTGGGCG GCAACTATAC CCAGGCGGCC GGCGGCACCC TGTCGATCGA GGTCAGCCCG
ACGGAGGCGT CGCAACTTCG CGTAGGCGGT GCCGCGACGC TCAACGGCTC ATTGGCCGTT
CTGTTCGATC CCGGCACCTA TACCGCACGC CGCTACACCG TGCTGAGTGC CGCCAACGGC
GTGACGGGCC GCTTCGCGAA CGTCGGCACC ACCACGGCCG GCGCGAATCT CGGCGCGTTG
CAGTCATCGG TGGACTACGG TGCCAATGGA GTCGACTTGC TGCTCGCCGA AGCCGCCGGG
CCCACGCCGG CCGGCCCGAC TGTCATCGCG CCGACCAAGA CCTCCATCTA CACCGCGCTC
GGCACGACGG CATTGCTTCA GGCGCAGGGC GCCAGTTCGA CGCTGCTCGG CCGTCTGGTG
GGCCCGCAGG ATAACGCGGC CGGTTCGCGC AACGTATGGG CCGTTGCCAG CGGTTCCAGC
ACCAAGGTGG GCGGCACGGG CGGCGCGCCC GGCTTTCTCA CCCACGCCTA TGGGTTCCTG
GCGGGCGCGG GAGGACGGCT CGGCGATGCG ACGGTCGGTG CGGCCGGCGG CTACACGCAC
ACCACGCTGG GTGAGGACAC GACAGGCGCA TCGGGTGCCA TCGATACGCT GCGTGTCGCC
CTGTATGGCG CGCAGCCCGT GGGTGCAGTC AACCTGTCGG CCACGGTCGG CTATGGGCTC
GATTTCCTGT CGCAGAAGCG GCCGTTCGGC AGCGCGGGTA CTGCCGAAGG CGATCATCTC
GGCCACGAGT TCACCGCCGC GACGCAGGCC AGCCTGCCCA TGGACGCCGG CGGCCTTCGG
ATCGCGCCGC ATATCGGGCT CCGGTATGCG TACGTGCGCG GCAGCGGCTT CGGCGAGAGT
GGCGCCAACG GCCAGAACCT GCACGTCGGC CCCGACAGCG CGAGGAGCCT CCAGCCTTAC
GTCGGCGTCT CGCTCGACAA GGCCTTCGGC GATGCCCTGC GCCCCGTCAA CGTACAGCTT
CGCGTGGCCT ATGCGCACGA GGTGCTGGGC GCGCGCCGCG TCGTCCAGGT GGGAAGCCAG
GACGGGACCG TGTTCGCCGC GCCGGGCACC GATCTGCCGC GTTCATTCCT GACCACGGGC
GCCGGCGTCA CGCTTCAAGC CGCCAAGGCG ACCACGGTAT CGCTCGGGTT CGATGCGACG
ATCGACACGA GCCATGTGTC GGCGCAGTCG GCGTATGTGC GGGTCAATCA CGCGTTCTGA
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| Protein sequence | MNRVYRLVWN RTLRAPQVVS ERTRASHGGI DASHGAMPAR RCAASIISIG MSLGLAGTAL
PGWAATCTVS TIANCSAPGG DGIPDRSGNG GSGNGGGGGA SALGGGTTTI QVPGGPTSGG
TGGTGAMNDS GQSGPGGAPG VAPAGDAVIN GNTQGGAGQG FDGFNFAGGG GGGGAGVYST
GTGVTVNNGV TVQGGTGGNG GAGTSGPASN GGGGGGGGGA LVIVTPAADV TNRGTLIGGN
GGNGGGGGNP GGGGGGGDGL LTVGPGSQVT NLGTIVGGVG GAAGGGGSTA GASGAGVNLG
GGFTVLSNVG AITGGAGNGG AAGAGVIANG GDVIVNGGTI AGGLFADGVT RAAAIRFNGA
NDTLQLVGGS NIIGDLDVAA GASATITAGT PGLALSNHIT LGDVASRVTL NSNTTDLAVS
GVISGTGNVA VSGSHTITLT GDSTYTGGTT ISAGTLQIGN GGATGSVVGD IVNNGTLAFN
RSDTVSYGGT ISGTGSLVQA GTGTLAIAGA AGYAGSTTVN AGTLALIGAG SIAASSGVIN
NGTFDISGTT SGATINALTG TGTVALGGQT LTLANAAGTF GGTIGGTGAV TVGGGTQTLS
AVNTYTGVTT VNAGTLALTG AGSIAASSGV VNNGTFDISG TTSGATINAL TGTGTVALGG
RTLTLANAAG TFAGTIGGTG AVIVGGGTQT LSGANTYTGV TAVNAGTLAL IGAGSIATSS
GVVNNGMFDI SGTTAGAMIN ALTGTGTVAL GDQTLTLANA TGTFSGAIGG TGGLTVAGGT
QNLSGANGYT GATSISAGTL ALSGAGSIAN SSGVINNGTF DISGTTSGAT VNALTGTGTV
ALGGRTLTLA NASGTFSGAI GGTGGLTVAG GTQTLSGVNT YTGATMVNAG TLALSGAGRL
ASSTSVTLAG ATAALDLSAG GSQTVAHLSG VAGSRVVLGG NALTLSDDSS QTFSGSLSGT
GGLVKQGAGT LTLNGVSSAF SGTTTVAGGT LAVGDAANAG AVLGGNVVVN SLGTLRGHGT
VSGDVSSSGV VAPGGSIGTL SVGGNYTQAA GGTLSIEVSP TEASQLRVGG AATLNGSLAV
LFDPGTYTAR RYTVLSAANG VTGRFANVGT TTAGANLGAL QSSVDYGANG VDLLLAEAAG
PTPAGPTVIA PTKTSIYTAL GTTALLQAQG ASSTLLGRLV GPQDNAAGSR NVWAVASGSS
TKVGGTGGAP GFLTHAYGFL AGAGGRLGDA TVGAAGGYTH TTLGEDTTGA SGAIDTLRVA
LYGAQPVGAV NLSATVGYGL DFLSQKRPFG SAGTAEGDHL GHEFTAATQA SLPMDAGGLR
IAPHIGLRYA YVRGSGFGES GANGQNLHVG PDSARSLQPY VGVSLDKAFG DALRPVNVQL
RVAYAHEVLG ARRVVQVGSQ DGTVFAAPGT DLPRSFLTTG AGVTLQAAKA TTVSLGFDAT
IDTSHVSAQS AYVRVNHAF
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