| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6458 |
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| Symbol | |
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| ID | 4315362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1087348 |
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| End bp | 1088241 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154302 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_778336 |
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| Protein GI | 115361199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.521655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG CATCCGAATC GGGCCGTCTC GATGATACGC CGGAGCCGGC CGCCCGCGCC
GCGGACGATA TCGCCGGGTT CGTGCGCGTG CGCCGGCGCT ACTGGGGCCG CTATGTCGCG
TCGATCGCGA TCATTGCCGC GCTCGCGTAT GTGGCGGTCG CGTTCGCGCG CGGACAGATC
GAATGGCGCG TCGTCGGCCA GTTCCTGACC GCACGCTCGA TCCTGACGGG GCTCGGCAAC
ACGATCGTGA TGACCGTCCT CGCGATGACG CTCGGCGTCG TGCTGGGCGT CGTCACAGCG
GTGATGCGGC TGTCGTCGAA CCCGGTGCTC GGCGCGATCG CGCACGGCTA CATCTGGTTG
TTCCGCGGCA CGCCGGTGAT CCTGCAACTG CTGCTGTGGT TCAACCTCGG GCTGGTGTTT
CCGACGCTCG GCATCCCGGG TATCGCCGAA TACCGGACCG TCGACGTGAT GACGCCGTTC
CTCGCGGCGG TGCTCGGGCT CGGCATCAAT CAGGGGGCCT ATACGTCGGA AGTCGTGCGG
GCGGGGCTGC TGTCGGTCGA CACGGGCCAG TACGAGGCCG CGAAATCGAT CGGCATGGCG
CGCCTGCAGG CGCTGCGCCG GATCATCCTG CCGCAGGCGA TGCGCGTGAT CGTGCCGCCG
ATCGGCAACG AGCTGATCGG CATGGTCAAG CTGACGTCGC TCGCGAGCGT CGTGCAGTAC
GCGGAGATGC TGCACAACGC GCAGAACATC TATTACGCGA ACGCCCGCGT GATCGAGCTG
CTGATCGTCG CGGGTATCTG GTATCTCGCG ATCGTCACCG TGCTGTCGCT CGCGCAGGCC
CGCGTCGAGC GGCGTTTCGC GCGCGGCGCG GGCCGGGCGG CGGGCCGCAC ATGA
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| Protein sequence | MLSASESGRL DDTPEPAARA ADDIAGFVRV RRRYWGRYVA SIAIIAALAY VAVAFARGQI
EWRVVGQFLT ARSILTGLGN TIVMTVLAMT LGVVLGVVTA VMRLSSNPVL GAIAHGYIWL
FRGTPVILQL LLWFNLGLVF PTLGIPGIAE YRTVDVMTPF LAAVLGLGIN QGAYTSEVVR
AGLLSVDTGQ YEAAKSIGMA RLQALRRIIL PQAMRVIVPP IGNELIGMVK LTSLASVVQY
AEMLHNAQNI YYANARVIEL LIVAGIWYLA IVTVLSLAQA RVERRFARGA GRAAGRT
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