Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6354 |
Symbol | |
ID | 4315258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 962356 |
End bp | 963939 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638154198 |
Product | extracellular solute-binding protein |
Protein accession | YP_778232 |
Protein GI | 115361095 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ATATCGACAA CGGCGGCAAG GGCGGCTTCA CGCGCCGCGA CATGATGAAG GTCATGGCGG CGAGCGGCAT GATGGCCGCC GGCGCCGGCG GACTGCTGAT GACCCCCGGC TCTGCATTCG CCGCGCCCGC GCCGAAGCGC GGCGGCAAGA TCCGGGTCGC GAACGAAGCC GGCTCGACGT CCGATACGCT CGACCCGGCC AAGGGCTCGA CGGGCGCGGA CTACACGCGC TTCTTCATGT TCTACAGCGG CCTCACGCAG CTCGATGCGA GCCTGACGCC GCAGATGAAC CTCGCCGAGT CGCTGCAGAC GACCGATGCG AAGACGTGGA TCATCAAGCT GCGCAAGGGC GTCACGTTCC ACGACGGCAA GCCGGTCGGC CCGGCCGACG TGGTGTTTTC GCTGATGCGC CACAAGAACG CGGCCACCGC GTCGAAGGTC AAGACGCTTG CCGAACAGTT CGTGGACGCG AAGGCGAGCG GCCCGGACGA AGTCACGCTC ACGCTCGCCA GCGCGAACGC GGACCTGCCG GTGATCCTCG CGACGCCGCA ATTGGTGATC GTCAAGGACG GCACAACCGA CTTCTCGACC GGCATCGGCT GCGGCCCGTA CAAGCTGAAG TCGTTCAAGC CGGGCGTGTC GACCGTCGGC GTGCGCAACG ACAGCTACTT CAAGCCGGGC AGGCCGTATC TCGACGAGAT CGAGCTGATC GGCATCAGCG ACAGCGCCGC GCGCCTGAAC GCGCTGCTGT CGGGCGACGT GCACCTGATC AACGCGATCG ATCCGCGCTC GACGCAGCGG GTCTCGTCGA CGCCGGGCTA CGCGCTGAAG GAAACCAAGT CGGGCCTTTA TACCGACCTG ATCATGCGCA GCGACAACCC GATCGTCTCG AGTCCCGATT TCGTCGAAGG GATGAAGTAC CTGTTCGATC GCGAGCAGCT CCGCACGGCG GTGTTCCGCG GCTACTCGGT GATCGGCAAC GACCAGCCGA TTCCGCCGGG GCACCGCTAC TTCAACGCGT CGCTGCCGCA GCGGGCGCAC GATCCGGACA AGGCGAAGTT CCTGTTCAAG AAGGCGGGCG CGCTCGGCGC CACGTTGCCG CCGGTCTATG CGACGTCCGA CGCGAACGGG TCGATCGAAA TGGCCGTGCT GCTGCAGCAG GCCGGCCAGA AGATCGGGCT GAACCTGCAG GTCAACCGCG CGTCGCCCGA CGGCTACTGG TCGAACCACT GGATGAAGCA CCCGCTCACC TTCGGCAACA TCAACCCGCG CTCGAGCGCC GACGTGCTGT TCACGCAGTT CTTCAAGTCG GATGCGCCGT GGAACGAGTC GGGCTGGAAG AACGCGAAGT TCGACCAGCT GCTGCTCGCC GCGCGTTCGG AAACCGACGA CGCGAAGCGC AAGCAGATGT ACGGCGACAT GCAGGTGATC GTGGCGCAGC AGGGCCGGGT CGGCATTCCG GCGTTCATCA GCTTCCTCGA CGGCTACGAC AAGCGGCTCG CGGGCCTCGG CTCGATCCCC ACCGGGCCGA TGATGGGCTT CACGTTCGCC GAGAACGTGT GGTGGAACGC ATGA
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Protein sequence | MSDDIDNGGK GGFTRRDMMK VMAASGMMAA GAGGLLMTPG SAFAAPAPKR GGKIRVANEA GSTSDTLDPA KGSTGADYTR FFMFYSGLTQ LDASLTPQMN LAESLQTTDA KTWIIKLRKG VTFHDGKPVG PADVVFSLMR HKNAATASKV KTLAEQFVDA KASGPDEVTL TLASANADLP VILATPQLVI VKDGTTDFST GIGCGPYKLK SFKPGVSTVG VRNDSYFKPG RPYLDEIELI GISDSAARLN ALLSGDVHLI NAIDPRSTQR VSSTPGYALK ETKSGLYTDL IMRSDNPIVS SPDFVEGMKY LFDREQLRTA VFRGYSVIGN DQPIPPGHRY FNASLPQRAH DPDKAKFLFK KAGALGATLP PVYATSDANG SIEMAVLLQQ AGQKIGLNLQ VNRASPDGYW SNHWMKHPLT FGNINPRSSA DVLFTQFFKS DAPWNESGWK NAKFDQLLLA ARSETDDAKR KQMYGDMQVI VAQQGRVGIP AFISFLDGYD KRLAGLGSIP TGPMMGFTFA ENVWWNA
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