Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6345 |
Symbol | |
ID | 4315249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 951565 |
End bp | 953085 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638154189 |
Product | diguanylate cyclase |
Protein accession | YP_778223 |
Protein GI | 115361086 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.155718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCAT CCCCTTCGAT CGAGAAAATT GCCGACTGGG CCGGTCGCCA CCACCTGATC GTCGGTGTGC TGGGCACGCT GATGTCGGTC GCGGCGCTCG GCATCAGCGC GGTGACGCTG TGGGCCGCGC GCAGCGAAGT CGTCGAACAT GCGCACGAGA CGTCGCGCAA TGTCGCGGCC GTCCTCGTCA GTGAGATCGC GCGCACCGTC GAAACGTCCA ACAATGCGCT GGTATCGCTC GCCGCCGATC TCGGCAACCC CGCGATCGTG CGCCTGAAGG CCGGCTTGCG CCACGACGTG CTGTTCGAGC GCACGGCCGC GCAATACGTG ACCGGCATGG GCGTGACGGA CCGCGACGGG CGGCTGATCG ACGGTTGTTG CGGCCCGACC CACAACTGGG ACTTCAGCGA TCGCGACTAC TTCAAGGTCC ATCGCGATTC GGACAACGTC GGCCTGTACG TGTCCGAGGC GTACCGCGCG CGTTCGCGCG GCGGCACCGA ATCGATCGCG CTGTCGCGCC GCATCGAACG GCCGGATCAT GCGTTCAACG GAATCGCGGT GGTCGCCGTC GATCTCGCCT ACTTCGATCA GCTGCTGTCG CGGTTGAACG TCGGACCGCA CGGCGTCAGC GCGATCCTGC GCGCGGACGG CACGATCCTC GCGCGCAATC CGCCGTTGAC CGATCACCAG ATGGTGCGCG TGCGCCGGTC GAAGTCGTTC GAGCGGATGG TGAGCCGCGA AGCGGGTTTC TATGCCGCGC GCTCGAGCAT CGACGGGACG TTGCGGCTGT ACACGTACCA GCGGGTACCC GGCACGCCGC TGATCGCCGT GGTCGCGCCG GCCGAGCGCG ACGTGCTGGC CGGCATCACG CGCCTGACGT GGACGGCGGG CGTGTCGGCG TCCGTGATCG GCGCGCTGTT CTGCGCGGTG GTGTGGCTGC TCGCGTTCGC GCTGCGCGAC AACCTGCGCA AGCAGACGCT GCTCACGGAC CTCACGCGCA CCGATCCGCT GACGGGCCTG CACAACCGGC GCGCGCTCGA TGCCGCGCTC GCCGACGAAT GGGAACGGCT GCAGCGCGGC AGCGACGGCA GCCTGTCGGT GCTGTTCATC GACGCCGATC ACTTCAAGCA GTACAACGAC CGCTACGGCC ATGCGCAAGG CGACACCGCG CTGCGCTTTC TCGCCGAATG CATCCGCGCG CATACGCGAC GGCGCGGCGA TCTCGCCGCA CGTTACGGCG GCGAGGAATT CGTCGCGGTG TTGCCCGACA CGGACGAGCG CGGTGCGCAG CAGGTCGCCG AAGCGATTCG CCACGCCGTG GAGCGCAACC AGCTCGACGG GTTCGACGCG ACGATGCCGG CCTTCACGGT CAGCATCGGC TGCGCGACCG GCCATCGCGC GCGGCCGCCG TCCATGCATG CGCTCACGCA TCAGGCCGAC CTCGCCCTCT ATGCGGCCAA GCGCCAGGGC AGAAACCGCG TGTGCGTCGC CGACGTGGAA CCGCTCGCAC AAACGGCGTG A
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Protein sequence | MPASPSIEKI ADWAGRHHLI VGVLGTLMSV AALGISAVTL WAARSEVVEH AHETSRNVAA VLVSEIARTV ETSNNALVSL AADLGNPAIV RLKAGLRHDV LFERTAAQYV TGMGVTDRDG RLIDGCCGPT HNWDFSDRDY FKVHRDSDNV GLYVSEAYRA RSRGGTESIA LSRRIERPDH AFNGIAVVAV DLAYFDQLLS RLNVGPHGVS AILRADGTIL ARNPPLTDHQ MVRVRRSKSF ERMVSREAGF YAARSSIDGT LRLYTYQRVP GTPLIAVVAP AERDVLAGIT RLTWTAGVSA SVIGALFCAV VWLLAFALRD NLRKQTLLTD LTRTDPLTGL HNRRALDAAL ADEWERLQRG SDGSLSVLFI DADHFKQYND RYGHAQGDTA LRFLAECIRA HTRRRGDLAA RYGGEEFVAV LPDTDERGAQ QVAEAIRHAV ERNQLDGFDA TMPAFTVSIG CATGHRARPP SMHALTHQAD LALYAAKRQG RNRVCVADVE PLAQTA
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