Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6318 |
Symbol | |
ID | 4315222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 917660 |
End bp | 918622 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638154162 |
Product | LysR family transcriptional regulator |
Protein accession | YP_778196 |
Protein GI | 115361059 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.988548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGA TCAAGCTGCA TCAGTTGCAG GCGCTCGTCG CGAGCGCGGA GGCCGGCAGC ATCCGCGGCG CGGCGCGCAC GCTCGGGCTG TCGCAGGCGG CCGTCACGCG CGCGCTGCGC GAGCTGGAGG CCAGCGAGCG CCTGCCGTTG CTGGTGCGCG CGCCGGAAGG CATCGGCTTC ACCGAGTACG GGAAGACCCT GCTCACGCAC GCGAAGCTCG TGCTCAAGCA ACTGGAGCAC GCGCAGAGCG ATCTCGAGCG GATGCGCGGG CGCGTCGAGG GCCGGCTGAG CGTCGGCGTC ACGCCGTGGC TGACGATGAC GTTCCTCGCG GAAACCGTGC TGCGGTTTCG CGAACGGATG CCCGACGTGC GCCTCGAGCT GTACGAAGCG CTGATGGCCG TCGCGCAACC GCTGCTGCGC GACGGCAGCA TGGATTTCGC GCTCGGCCAC GTACAGCCCG GCAGCGGCGC GCAGGAATTC GCATTCGAGC CGCTGCTGCG CTACGACACG TCGGTGATGG TGCGCGCCGG CCATCCGCGC GAACGCGCGA AGTCGGTGCA CGACCTGCTC GATTGCGACT GGGTGCTGAA TTCGTCGCCC GACGGTCAGG CCGCGCTCGT CGACTACCTG TTCACGCGGC ACGGCGCGCA GATCGACGAA CGGCGCATCG TGCGCGCGCA GTCGGTCGCG ATGCTGCAAA CCATGCTCGA ACAGGCCGGC ATGTGCACGT GGTGCCCGAC CATCCTCGCG GCCGTGCCGC CGTTCGGCGA GCGGATGCGC GTGCTGTCGC TGAAGGAAAC CTTCGAGCCG AGCGAACTCG GCATCGTCAC GCGTCGCAGC AGCACGCTGA GCGACGCCGC GCGCTGCTTC ATCGACTGCC TGCTGCAGAC GATCCGGCGG CATGCGCGCT CGGCGCGAAA GGAGGATCTC GCGCTGTTCC GCACGCTGAC GCTATTGATC TGA
|
Protein sequence | MSTIKLHQLQ ALVASAEAGS IRGAARTLGL SQAAVTRALR ELEASERLPL LVRAPEGIGF TEYGKTLLTH AKLVLKQLEH AQSDLERMRG RVEGRLSVGV TPWLTMTFLA ETVLRFRERM PDVRLELYEA LMAVAQPLLR DGSMDFALGH VQPGSGAQEF AFEPLLRYDT SVMVRAGHPR ERAKSVHDLL DCDWVLNSSP DGQAALVDYL FTRHGAQIDE RRIVRAQSVA MLQTMLEQAG MCTWCPTILA AVPPFGERMR VLSLKETFEP SELGIVTRRS STLSDAARCF IDCLLQTIRR HARSARKEDL ALFRTLTLLI
|
| |