| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6316 |
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| Symbol | |
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| ID | 4315220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 915416 |
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| End bp | 916897 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154160 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_778194 |
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| Protein GI | 115361057 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.910059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAAGC CATCAAGCCG AAGCAGAAAA AGTTTGAGCG TCCTGTTTAC GCTGGACGGC
AAAGGGGTGC TGGTCGACCA GCTGGTTAGA GCATTGCGCA TCGAGATCGC GAAGGCACAA
CCTGGCACGC GACTGCCGCC GACGCGCGAT CTGGCGAAAG AACTCGGCGT CTCCCGAAAC
ACCGTCACGA CGGCTTACAG CGAGCTTGTG AACGAAGGGT GCATCGTTAG CCGCTTCGGC
GCTGGATCGG TCGTTGCGGA GCGCCTCGCC GGCAAGCCGG CAGCGGCAGC TCCCACGACG
CATGCAGCGA CGCCCGCTCC GGTGCTGTCC CATTTCGCGA GACGCCTGCG GAGTCTCGAA
CCGTCGCCGA TCCTCGAGCG GCCGGAGCTG AAATACGACT TCAGGTACGG CCTGCCGGTG
ACGGACGACT TTCCGTTTTC GAAGTGGTCG CGGATCGTCG CGCGGCGCGC GACCGTCAGC
GCCACATCCA ATATCGGCTA TGGCCATCCG GGCGGCTATC CGGCGCTGCG CACCGAGATC
GCCGAGTATC TGGCGCGGGC CCGCGGAATC CAGTGCCGGC CGGACGATAT CGTCATCACG
AACGGTTCAC AGCAGGCGCT CGACCTGATC GCGCGGCTGC TGATCGATCC GGAGGACGGC
GTGGTCATCG AGGAGCCGCA TTTCGAAGGC GCGCGGGAGG CATTCGCCGC GGCCGGCGCA
CGGATCATCG CGGTGCCCGT CGACAAGGAC GGCCTGCAGA CCGCGAAGTT ACCGGGCGCT
TCCGCGCACT GCCGGGCCGT CTATGTGACG CCGTCGCATC AGTTTCCGAC CGGCGCGATC
CTTTCCGCGA CGCGGCGCCG CGAACTGCTC GACTGGGCCG GCGAACACAA TGCGTTCGTC
GTCGAGGACG ACTACGACGC GGAGCTACGC TACGACGTGC GGCCGCAAGC GTCGATCAAG
GCCGTGGACA GCGGCGACCG TGTCATCTAC GTGGGGACGA TGTCGAAGGT GCTTTTCCCG
TCGCTTCGGA TCGGCTACAT CGTCAGTCCG AGGCACCTGC TGCCCAGTCT GCTGGCCGCG
AAACACGTCT GTGACCGGCA GACGCCGCTG CTGTTGCAGT CGTCGCTGAG CGACTTCATC
TCGCAAGGCC ATTTCGACCG CTACCTGGTC GAGCAGAAGC GCCTCTGCGG CCGCAAGCGT
GCCGCGTTCA TGCGCGCGGT GGACGAATGC CTGGGCGAGC ACGTCACGGT GCAGGGCATC
AGCGCGGGCA TCCATGCGCT GGTCTGGCTC AACAAGCGCA CGTCCTGCGA CGTTCCGAAG
CTGATCGACG CGGCCGCGCA GGCCGGCGTC GGCATCTATC CGGTGACGCC GTATTTCCTC
CACGCGCCCC GAAAGGCCGG ACTACTGCTC GGCTATGCGT CGATGGAAGA GGCGCTCATC
CGCGAAGGCA TCGAACGTCT GGCGCGCGTG GTGCGCGGCT GA
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| Protein sequence | MEKPSSRSRK SLSVLFTLDG KGVLVDQLVR ALRIEIAKAQ PGTRLPPTRD LAKELGVSRN
TVTTAYSELV NEGCIVSRFG AGSVVAERLA GKPAAAAPTT HAATPAPVLS HFARRLRSLE
PSPILERPEL KYDFRYGLPV TDDFPFSKWS RIVARRATVS ATSNIGYGHP GGYPALRTEI
AEYLARARGI QCRPDDIVIT NGSQQALDLI ARLLIDPEDG VVIEEPHFEG AREAFAAAGA
RIIAVPVDKD GLQTAKLPGA SAHCRAVYVT PSHQFPTGAI LSATRRRELL DWAGEHNAFV
VEDDYDAELR YDVRPQASIK AVDSGDRVIY VGTMSKVLFP SLRIGYIVSP RHLLPSLLAA
KHVCDRQTPL LLQSSLSDFI SQGHFDRYLV EQKRLCGRKR AAFMRAVDEC LGEHVTVQGI
SAGIHALVWL NKRTSCDVPK LIDAAAQAGV GIYPVTPYFL HAPRKAGLLL GYASMEEALI
REGIERLARV VRG
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