| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6299 |
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| Symbol | |
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| ID | 4315203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 894103 |
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| End bp | 895080 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638154143 |
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| Product | type II secretion system protein |
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| Protein accession | YP_778177 |
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| Protein GI | 115361040 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCGA TCTATTACGG TTTTGTGATT CTCACCTTCG TCGCGGTGGT GCTCGCGATC
GAGGGCGTCT ATCAATGGTG GAACGCGCGT CATGGTGCCG CGGCACGCCG GATCGAGTCG
CGCCTGCGCG CGATGTCGGC CGGCGGCAGC GTGCAGCAGG AGCGGCTGTC GATTCTCAAG
AAGCGGATGC TCGACGAGTC GAAGCCGTTC GACCGGCTGC TGATGCGGGT GCCGCGTATT
CAGGCGCTGG ACCTGGTGCT GCAGCAGTCG GGGCTCGACT GGACGGTCGC AAAGCTGGTC
ACGATCAGCG CCGTATTGCC GGTCACGGCG GCGCTCGCCC TGGCCGTCAC CCCGTTGCCG
CTGATCGCCG TGCTGCCGAT CGCGCTGCTG ACCGCATGCC TGCCGGCGAT GTACGTGATG
CGGCATCGCA ACCGGCGGAT GCTCAAGCTC GAGCGCCAGC TGCCGGACAT CTGCGACATG
ATTGCGCGCG CGTTGCGCTC CGGTCATTCG TTCTCGAGCG CGCTCGGGAT GGTCGGCGAG
GAGTTTCCCG ATCCGATGGG CGGTGAATTC CGGATCACGT TCGACGAGAT CAACTACGGC
GTGTCGCTGC ACGATGCGCT GGTGAACCTC GCGACGCGCG TGCCGGCTCA CGACCTGCGC
TACTTCGTGA TCGCGGTGCT GATCCAGCGC GAGACCGGCG GCAATCTGGC CGAGCTGCTC
GACAGCATCG CGTCGCTGGT GCGCGAGCGC TTCAAGCTGT TCGACAAGGT CCGCGTGCTG
TCGGCGGAAG GGCGGCTGTC GGCCTGGATC CTCGGGCTGT TGCCGTTCGG CACCGCGGCC
ATGATGGCAA TGATGAACCG GGAGTTTCTG TCGGTGCTCT GGCAGGATCC GGCGGGCATC
AAGATGGTCG GCGTGATGCT GGGGTCGATG GCATTCGGCC TGCTGTGGAT TCGCCGCATC
ATCCGCATTC GCGTCTGA
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| Protein sequence | MDSIYYGFVI LTFVAVVLAI EGVYQWWNAR HGAAARRIES RLRAMSAGGS VQQERLSILK
KRMLDESKPF DRLLMRVPRI QALDLVLQQS GLDWTVAKLV TISAVLPVTA ALALAVTPLP
LIAVLPIALL TACLPAMYVM RHRNRRMLKL ERQLPDICDM IARALRSGHS FSSALGMVGE
EFPDPMGGEF RITFDEINYG VSLHDALVNL ATRVPAHDLR YFVIAVLIQR ETGGNLAELL
DSIASLVRER FKLFDKVRVL SAEGRLSAWI LGLLPFGTAA MMAMMNREFL SVLWQDPAGI
KMVGVMLGSM AFGLLWIRRI IRIRV
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