Gene Bamb_6295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6295 
Symbol 
ID4315199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp890480 
End bp891013 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID638154139 
ProductTadE family protein 
Protein accessionYP_778173 
Protein GI115361036 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGC TCCCGATTCG CCGGTCACGC ATGCGCGGTG TCGCCGCGGT CGAATTCGCG 
CTCGTGCTGA TGCCGATGAT CGTGCTTGCG ACCGGCGTGG CCGAGTTCGG CCGCGCGATC
TACCAGTACG AGACGCTCAC GAAGGCGACG CGCAACGCGG CGCGCTACCT GTCGGTGTTT
TTGCCGAACG ACAGCGCGTA TCCGCTCGCG GCGGCGCAGT GCCTCGTCGT GTACGGCAGC
ACCACGTGCG GCTCCGCCGG CACCGAGCTG GTGCCGGGGC TCACGACGTC GATGGTGATC
GTGTGCGATG CCACGCATTC GACCGATTGC GGCGACGCGT CCGACCCGTC GCAGTTCGCG
AACCTGCCGA CCTACGACTC GACCAACAAC GCGCCAAGCG GCACGGCGAC CGGCAGCATC
AACCTCGTCG AAGTGAAGGT GAAGGGCTAT CAGTACCAGC CGATTCCGGC CTACCCGGGG
CTGTCGTCGA TCACCTTCGG CAACATCGTC ACCGTGATGA GGCAAGTGTC ATGA
 
Protein sequence
MKRLPIRRSR MRGVAAVEFA LVLMPMIVLA TGVAEFGRAI YQYETLTKAT RNAARYLSVF 
LPNDSAYPLA AAQCLVVYGS TTCGSAGTEL VPGLTTSMVI VCDATHSTDC GDASDPSQFA
NLPTYDSTNN APSGTATGSI NLVEVKVKGY QYQPIPAYPG LSSITFGNIV TVMRQVS