| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6291 |
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| Symbol | |
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| ID | 4315195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 885920 |
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| End bp | 886765 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154135 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_778169 |
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| Protein GI | 115361032 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0737796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GTCGAGCGCT CATGATGCTG ATCATCGCGA TGGTCGCGGG GCTAGCCGCG
GTCGTGTTCG CATCCCGCTG GTTGATGCAT ACATCCAGCA GCTCGGTCAC GTCGGTCGCG
GTCGCGACCA CCGACCTGAA CCTGGGCGAG CCGCTCGGGC CGAACCAGAT CCACATGGTG
AGCTGGCCGT CGGGCAGCGT GCCGACCGGC GCGTTCGCCG ACACGAAGGA GCTCGAAGGG
CGCGTCGTGC GCACGAGCCT CGCCCGCGGC GAGCCGGTGA TCGAGTCGAA GCTCGCGCCG
GTCGGCACGA AGGGCGGGTT GTCCGCAGTG ATTGCCGACG GCAGCCGCGC GATCACCGTG
CGCGTGAACG ACGTGGTCGG CGTCGCGGGC TTCGCGCTGC CGGGCAACTA CGTCGACGTG
ATCGTCAACA CGCAGGAACA GCAGGGCAAG ACCGACGGGC AGAGCATCTC GAAGATCGTG
CTCGAGCACA TCCTCGTGCT CGCCGTCGCG CAGCAGGTCA GCCGCGACGA CACCGCACCG
AAGGTCGTCA ACGCGGTGAC GCTCGAAGTC ACGCCCGATC AGGCCGAACG CCTCGACCTC
GCGCGCAGCG TCGGCACGCT GTCGCTCGTG CTGCGCAACC AGGTCGACCA GAAGACGCTC
ACCACCGACG GCGCAACCAA GCTGACGTTG CTCGGCAAGG CCCCGGTACC CGACGCGACG
CCCGCACCGG CACCCGCGCA CGTACGGACC GTGCGCGTGC ATGTCGCGTC GCACGCCGCA
CCGGAAGCGC GCCGCGATTG CGTCGGTGTA CTGACCGGTG TGCACGGCAG CGTCGAATGT
TTCTGA
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| Protein sequence | MKNSRALMML IIAMVAGLAA VVFASRWLMH TSSSSVTSVA VATTDLNLGE PLGPNQIHMV
SWPSGSVPTG AFADTKELEG RVVRTSLARG EPVIESKLAP VGTKGGLSAV IADGSRAITV
RVNDVVGVAG FALPGNYVDV IVNTQEQQGK TDGQSISKIV LEHILVLAVA QQVSRDDTAP
KVVNAVTLEV TPDQAERLDL ARSVGTLSLV LRNQVDQKTL TTDGATKLTL LGKAPVPDAT
PAPAPAHVRT VRVHVASHAA PEARRDCVGV LTGVHGSVEC F
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