Gene Bamb_6239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6239 
Symbol 
ID4315143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp821172 
End bp822419 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content63% 
IMG OID638154083 
ProductUDP-glucuronosyl/UDP-glucosyltransferase 
Protein accessionYP_778117 
Protein GI115360980 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0770059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.903811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCTG CCGCATCCAT CTTGATATCG GAAGGCAATC AAGTCGCAGC GCTGACCGGT 
GAGCAGTTTC GCCGGCAGTT CGAGGATATC GGCGCGTTGT TCCATCCTCT TCCGGCCGAT
GCGTCGCCAG ACGTTGCCCA TGTCATTGCC CATGATCCGA CGCTCAGGAA CCTGCCCGAG
GATGCACCGC AATTGATGCG TTTTCAGATC GCCGTCGAAC GCGCGCTGGT CGATCCTATC
CCGCTTCAGC ATGTGATGCT GCAGGCAGTG CTACGCCACT TCGCCGCCGA CGTCATCCTC
ACCGAAAGCG GGTTCCTCGG CATTCTGCCG CTCCTGTTGG GCGCCCGCGA AAGGCGCCCC
CGGGTGGTCA TCTGCGGTAC GTATTTTCTG ACCTGGGAAC GGGATGACGG TGCGCCGTAT
CTTGGCGGGT GGCGACCCGC GTCCACGCAG GCACAGCGTG CGCAGTACGC CGGCCTTTCG
CGCGACCATG ACAGGTTGTT CGAGCAGCCG CTAATCGCAC GCGCCGATGA ACTCATGAAG
GACCTGGGCG CCCGCCCGTT GCATCGAGGC GTTTTCGAGT CCGCCATTGA ACTCGCGGAC
GCCTATTTGC AACCGTCCGT GCCGAGCTTC GAATTTCCGC GCGCGTCGCT GCCTGCGTCC
GTGCGATTCA TCGGGGGCTT GCCCATTACG CCGAACCTGC ATCCATTGCC TGCGTGGGCC
GCGGACCTGG ACGGCCGAAA AAAGGTCGTA CACGTCACAC AAGGCACCGT CGCGAACAAG
GACTTCGGCA TGCTGCTCGC ACCCACGTTG GCCGCCCTTG GCGACGATCC CGGCGTTCTG
GTTGTCGCGA TCACCGGCGG CCGGCCGCTC GACACCATTC CGGGGACCAT GCCTCCGAAC
GCACGCGTGG CCAGTTTTCT GCCGTATGAA TGGTTGTTGC CCAAGGTCGA CGTATTTGTC
ACGAATGGCG GCAACGGGAG CGTCAACCAG GCATTGACCT TCGGTGTTCC GCTCGTGACC
GCCGGACTGA GCGAAGACAA GGCCGACGTG AACGCGCGAG TCGCGTGGTC CGGAGTCGGT
ATCGATCTTG CAACCGGACA TCCCACGCCT GATGCGTTGC GCAACGCGAT CCGGACGGTA
CTCGCCAATC CAGGCTACCG GATCGAGGCC GCTCGCAAGG CCCGCGAGTT TGCAGCAATC
GATACGCGCG CCGAAATCAT CCGGGCCGTC ACGAGCCGAT CGACGTAG
 
Protein sequence
MASAASILIS EGNQVAALTG EQFRRQFEDI GALFHPLPAD ASPDVAHVIA HDPTLRNLPE 
DAPQLMRFQI AVERALVDPI PLQHVMLQAV LRHFAADVIL TESGFLGILP LLLGARERRP
RVVICGTYFL TWERDDGAPY LGGWRPASTQ AQRAQYAGLS RDHDRLFEQP LIARADELMK
DLGARPLHRG VFESAIELAD AYLQPSVPSF EFPRASLPAS VRFIGGLPIT PNLHPLPAWA
ADLDGRKKVV HVTQGTVANK DFGMLLAPTL AALGDDPGVL VVAITGGRPL DTIPGTMPPN
ARVASFLPYE WLLPKVDVFV TNGGNGSVNQ ALTFGVPLVT AGLSEDKADV NARVAWSGVG
IDLATGHPTP DALRNAIRTV LANPGYRIEA ARKAREFAAI DTRAEIIRAV TSRST