| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6225 |
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| Symbol | |
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| ID | 4315129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 797861 |
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| End bp | 798619 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638154069 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_778103 |
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| Protein GI | 115360966 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAGAC TATTCGATAA AGTGGCGCTG GTGACGGGCG CAACGTCCGG AATCGGCAAG
GCGACCGCAA TGCTGTTCGC GAGGGAAGGC GCCAAGGTCG CCATCGCGGC ACGGCGGGAA
GAGGAAGGAC GGCAGGTCGT CCGGGAAATC CTCGACCACG GTGGCGAAGC CATATTCGTC
CGGACGGACG TCGCTCAAGC CGAGGATTGC GCTGCCGCGG TCGCGCGCAC GGTCGCGTCG
TTCGGCAAGC TCGATATCGC GTTCAACAAT GCCGGCATCA CGAGCTTCGG GAGGCCGGTA
GCCGATACCG ACGAACAGGC GTGGAGCACC GTTATCGACG TCAACCTAAC GGGGACGTTC
CTGTCGATGA AATACGAAAT CCCCGAGATA TTGAAGGCGG GCGGCGGCTC CATCATCAAC
ATGTCGTCCG CATACGGCCT GGCGGGATCC GCATTCGGCG CCTGCTCCTA TCATGCGTCG
AAGCACGGGG TCATCGGCCT TACGCGGGCA GCGGCACTCG AGTACGCAAA GGAAAAGCTG
CGGGTCAATG CGATCTGCCC CGCGTTCGTG GCAACCGACA TGATCGGCGC GTTTCTCGAA
CAACCGGAGC AGGCGGCCCA ACTGGCAGCA CTGCATCCGG TCGGCAGGAT GGGCACGCTT
GCGGAAACGG CTGAAGCGGT CGTCTTTCTC GCAAGCGATG CGTCGACCTT CATCACCGGC
ACCACGCTGT CGATCGATGG CGGAATGGGC GCCGGCTGA
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| Protein sequence | MERLFDKVAL VTGATSGIGK ATAMLFAREG AKVAIAARRE EEGRQVVREI LDHGGEAIFV
RTDVAQAEDC AAAVARTVAS FGKLDIAFNN AGITSFGRPV ADTDEQAWST VIDVNLTGTF
LSMKYEIPEI LKAGGGSIIN MSSAYGLAGS AFGACSYHAS KHGVIGLTRA AALEYAKEKL
RVNAICPAFV ATDMIGAFLE QPEQAAQLAA LHPVGRMGTL AETAEAVVFL ASDASTFITG
TTLSIDGGMG AG
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