| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6220 |
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| Symbol | |
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| ID | 4315124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 790238 |
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| End bp | 790996 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638154064 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_778098 |
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| Protein GI | 115360961 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.621886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAGC TTCAAGACAA GGTGGCCCTC GTCACGGGCG GGAATTCGGG CATCGGCCGG
ACCACGGCGC TGTTGTTTGC ACGGGAAGGC GTGCGCGTCG CGATCGCATC GCGCCGCATC
GACGAAGGCC TGGCCGTCGT CGAGGAAATT CGCAGCGCTG GCGGCGACGC GACGTTCGTG
AAAACCGATG TTTCCAGGGC CGAGGATTGC GCGAATGCGG TCGCGCAGGC CGTAAAACAA
TTCGGCAGGC TGGATATTGC TTTCAATAAC GCAGGCGTTG AAGCGTTCGG CAATGCCGTG
GCCGATACCG ACGAGGCGAC CTGGGATTTT GTCGTGGACA TCAATCTGAA AGGGGTGTTC
CTTGCGATGA AATATGAAAT TCCGGAATTG CTGAAAACCG GGGGCGGATC GATCATCAAT
ATGTCATCGA CCTATGGCCT GGTGGCATCG GCATTCGGCG GCTGCGCATA TCACGCGTCG
AAGGCAGGCA TTCTCGGATT GACGAAAGCG GCCGCGCTCG AATACGCGAA GCAGAAAATC
CGCGTCAATG CGATTTGTCC GGCATTCGTC GCCACGGCGA TGGTCGAAAA ATTCCTAGAC
GAAACCCATA TGACCGACCA GATCAAGAGC TTTCATCCGG TCGGCCGCCT GGGTACCGAA
GAGGAGATCG CGCAGGCCGT CGTGTTCCTC GCGAGCGATG CGTCGTCGTT CATGACGGGC
ACCGCGCTTT CCGTGGACGG CGGCATGACC GCGGCTTGA
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| Protein sequence | MLKLQDKVAL VTGGNSGIGR TTALLFAREG VRVAIASRRI DEGLAVVEEI RSAGGDATFV
KTDVSRAEDC ANAVAQAVKQ FGRLDIAFNN AGVEAFGNAV ADTDEATWDF VVDINLKGVF
LAMKYEIPEL LKTGGGSIIN MSSTYGLVAS AFGGCAYHAS KAGILGLTKA AALEYAKQKI
RVNAICPAFV ATAMVEKFLD ETHMTDQIKS FHPVGRLGTE EEIAQAVVFL ASDASSFMTG
TALSVDGGMT AA
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