Gene Bamb_6040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6040 
Symbol 
ID4314944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp600811 
End bp601497 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID638153884 
ProductLuxR family transcriptional regulator 
Protein accessionYP_777918 
Protein GI115360781 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.917081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT TGTCGCGCGC GCTGAGCTTC GACGATGTAT TCGAAATCGT TGCCGCACAG 
GCACGCGCGC TCGATTTTGA AATGTGCGCC TATGGCGCAC GCGACCCGTT ACCCGTGACG
CGGCCCACGT TCCGTACACG CAATACCTAC CCGGAATCCT GGCAACAGCG CTATATCGAG
GGAAACTATT TCGCACGCGA CCCCGTCGTC CGTTACGGGC TGATCTATAC GTCACCGCTT
GTATGGCCTG TCGATGCGTG CGCCGATGAA TCATTCTGGG AGGAAGCGAA GGCGCATGGG
GTTGCGCACG GCTGGTCGCA GCCCATCCGC GACAAGCACG GGCGCATCGC GATGTGGAGC
GTCGCGCGCA GCGCGGACCC GATTTCGGAT CTCGAACTTG CCGCCACGGA AAGCCGGCTG
ATCTATCTGG CGCACGCCGC TCACGCGGTG AATTCGCGCC TGGTCGACGC GCCTGCAGCC
GCGATGCAAA TGGGCCCGTT CACCACGCGC GAAAAGGAAG TGCTGAAATG GGCCGCTGAC
GGGAAGACCG CGCTGGAAAT CGCTTCCATT CTTTCCATCT CGGAGCGAAC CATCACCTTC
CACATGCAGA ACATCATGGA GAAACTCAAC TCGGTCAATA AGACACAAGC GATCGTCAAG
GCCGTGTTGC TCGGCATCAT CTACTAA
 
Protein sequence
MTTLSRALSF DDVFEIVAAQ ARALDFEMCA YGARDPLPVT RPTFRTRNTY PESWQQRYIE 
GNYFARDPVV RYGLIYTSPL VWPVDACADE SFWEEAKAHG VAHGWSQPIR DKHGRIAMWS
VARSADPISD LELAATESRL IYLAHAAHAV NSRLVDAPAA AMQMGPFTTR EKEVLKWAAD
GKTALEIASI LSISERTITF HMQNIMEKLN SVNKTQAIVK AVLLGIIY