Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6040 |
Symbol | |
ID | 4314944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 600811 |
End bp | 601497 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638153884 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_777918 |
Protein GI | 115360781 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.917081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGT TGTCGCGCGC GCTGAGCTTC GACGATGTAT TCGAAATCGT TGCCGCACAG GCACGCGCGC TCGATTTTGA AATGTGCGCC TATGGCGCAC GCGACCCGTT ACCCGTGACG CGGCCCACGT TCCGTACACG CAATACCTAC CCGGAATCCT GGCAACAGCG CTATATCGAG GGAAACTATT TCGCACGCGA CCCCGTCGTC CGTTACGGGC TGATCTATAC GTCACCGCTT GTATGGCCTG TCGATGCGTG CGCCGATGAA TCATTCTGGG AGGAAGCGAA GGCGCATGGG GTTGCGCACG GCTGGTCGCA GCCCATCCGC GACAAGCACG GGCGCATCGC GATGTGGAGC GTCGCGCGCA GCGCGGACCC GATTTCGGAT CTCGAACTTG CCGCCACGGA AAGCCGGCTG ATCTATCTGG CGCACGCCGC TCACGCGGTG AATTCGCGCC TGGTCGACGC GCCTGCAGCC GCGATGCAAA TGGGCCCGTT CACCACGCGC GAAAAGGAAG TGCTGAAATG GGCCGCTGAC GGGAAGACCG CGCTGGAAAT CGCTTCCATT CTTTCCATCT CGGAGCGAAC CATCACCTTC CACATGCAGA ACATCATGGA GAAACTCAAC TCGGTCAATA AGACACAAGC GATCGTCAAG GCCGTGTTGC TCGGCATCAT CTACTAA
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Protein sequence | MTTLSRALSF DDVFEIVAAQ ARALDFEMCA YGARDPLPVT RPTFRTRNTY PESWQQRYIE GNYFARDPVV RYGLIYTSPL VWPVDACADE SFWEEAKAHG VAHGWSQPIR DKHGRIAMWS VARSADPISD LELAATESRL IYLAHAAHAV NSRLVDAPAA AMQMGPFTTR EKEVLKWAAD GKTALEIASI LSISERTITF HMQNIMEKLN SVNKTQAIVK AVLLGIIY
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