Gene Bamb_6008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6008 
Symbol 
ID4314912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp559892 
End bp560746 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID638153852 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_777886 
Protein GI115360749 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG AACAACTTGC CGAATTGCGG GCGCAGCTCG CAGCCAAGGC CAAGCAGGAG 
CGCAATGCGA AGCGACCGGC TGCGCAACCG GACGCCGGCG CGAAGCCGAA GTCCGGCGAC
CGGCCCGCTC GTGGGGCCAA ATCGGGTGCC GCGGCCAAAG CGCCGTCCGG TGCCAAGCCC
GCTTCGGCGA AGCCGTCGAC CCCGGTCGAT CCGGTCATTG TCGCGATCGG CAAACTGCAG
CGCCGGTTCC CGCGCGCGTT TCCGAAGAAT CCGGCTCCGA AGGTGCCGCT GAAGGTCGGC
ATCTGGGACG ATCTCGCCCG CGAGGCGCAG GCCGTCGGCC TGACTGAAGC CGAACTGCGC
GAGGCGATGT CCACGTGGTG CCGCGGCAAT CGTTACTGGT CGTGCCTCGT CGAAGACGCG
GTGCGGGTCG ATCTGCAAGG TAACGAAGCC GGGCGCGTGA CGCACGACGA CGCGGCGCGT
GCGCGCCGGC TGAAGTCGCG TCGTCCGGGC AACAAGGGCA GCGCGCAAGC GGCAAAGGGC
GCACCGCAGC AGCCGAAGGC GGACGCGCAG GCCGACGCCG CCGCGGCGCA GCCGGCGATC
GACGAAGCAC CGGCCGACGC AGCACCGGCA AATGCAGCAC CGGCAAATGC AGCACCGGCA
AATGCAGCAC CGGCAAATGC AGCACCGGCA AATGCAGCAC CGGCAAATGC AGCACCGGCA
AATGCAGCAC CGGCAAATGC AGCACCGGCG AATGCAGCAC CGGCGAATGC AGCACCGGCG
AATGCAGCAC CGGCCAATGC AGCACCGGCC AATGCAGCAC CGCAGGCCGA GCAGCAAACG
GCTGCGAGCG AGTAA
 
Protein sequence
MGFEQLAELR AQLAAKAKQE RNAKRPAAQP DAGAKPKSGD RPARGAKSGA AAKAPSGAKP 
ASAKPSTPVD PVIVAIGKLQ RRFPRAFPKN PAPKVPLKVG IWDDLAREAQ AVGLTEAELR
EAMSTWCRGN RYWSCLVEDA VRVDLQGNEA GRVTHDDAAR ARRLKSRRPG NKGSAQAAKG
APQQPKADAQ ADAAAAQPAI DEAPADAAPA NAAPANAAPA NAAPANAAPA NAAPANAAPA
NAAPANAAPA NAAPANAAPA NAAPANAAPA NAAPQAEQQT AASE