Gene Bamb_5977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5977 
Symbol 
ID4314881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp519069 
End bp519593 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID638153821 
Productmetal dependent phosphohydrolase 
Protein accessionYP_777855 
Protein GI115360718 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000432758 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC TGGTAGCTGC CATCGCATTC GCGGCGGACA AGCATCGCAA TCAGCGGCGC 
AAGGACGACG AGGCATCGCC GTACATCAAC CATCCGATCG CGCTGGCCGA TGTGCTGGCC
AACGAAGCCG GCATCGAGGA CGAGCGCGTG ATCGTCGCGG CCGTGTTGCA CGACACGATC
GAGGATACGG AGACGACCGA GCAGGAACTG CTGCGGCTGT TCGGCAAGGA CGTCGCGGAC
ATCGTGATGG AAGTCACCGA CGACAAGTCG TTGCCGAAGG AAGAGCGCAA GCGCCTTCAG
GTCGAGCATG CGGCGAGCAT CAGCCGGCGC GCGAAGCTCG TGAAGCTGGC CGACAAGATC
TGCAACCTGC GCGACATCAC GCGGCATCCG CCCGCGGACT GGCCGCTCGA GCGAAAGCAG
GCGTACTTCG ACTGGGCGAA GTCGGTCGTC GACCGGATGC GCGGCGTGCA TCCCGGCCTG
GAAGGGATCT TCGATGCCGC GTACGACGCG CGGCCGGCGG ACTGA
 
Protein sequence
MNKLVAAIAF AADKHRNQRR KDDEASPYIN HPIALADVLA NEAGIEDERV IVAAVLHDTI 
EDTETTEQEL LRLFGKDVAD IVMEVTDDKS LPKEERKRLQ VEHAASISRR AKLVKLADKI
CNLRDITRHP PADWPLERKQ AYFDWAKSVV DRMRGVHPGL EGIFDAAYDA RPAD