Gene Bamb_5976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5976 
Symbol 
ID4314880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp518376 
End bp519059 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID638153820 
Producthypothetical protein 
Protein accessionYP_777854 
Protein GI115360717 
COG category[S] Function unknown 
COG ID[COG2410] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000703041 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGG CCCGATCCCG ATCCGTCGCG TGGTCGGTGC CTGCGGTGGC GGGCGTCGAT 
GTCGGCGGCG ACAAGAAGCA ATGCGATCTC GTGATCCTGC GCGGCTCGAC GATCGTCTGC
CGCGAGGCTC GGATCGCACC CGAAGCGCTG CCCGCGCTGT GCATCGAGCA TGGCGTGGTG
GCCGTCGGCG TCGATGCGCC GAGCCTGTGG TGGACGGGAA GCGGACGCCG CGCGGCCGAG
CAGGCGCTCG CGCGCGAGCG GATCTCGTGC TTTCCGACGC CGTCGCGCGA ACAGGCCGTG
ACCAGTGCGT CGGGCTTCTT CGACTGGATG TTCATGGGCG AGCGCGTGTA CCGCGCGCTG
GCGCAGGCCT ATCCGCTGCT CACCGATGCA CGGTACGCCG GCGGGAACGT GAGCTTCGAG
ACCTATCCGT ACGCGATTAC CTGCGCGATG CTCGGCAAGG CGATTGCGTC GGCGAAGCAG
AAACGCAACC AGCGCCGGCA ATTGCTCGCG CAAGTCGGGA TCGACGTGTC GACTCTGCGC
TCGGTCGACG CGCGGGACGC GACGCTGTGC GCATTGACCG CGCAATACGT AATCGATGGA
AATGCGCACG CGTATGGCGA TGCGGTGGGC GGGTACATCC GTGTGCCGAT CGTCAGCGAG
ACGATCGTGC TCGATACGCT CTAG
 
Protein sequence
MRAARSRSVA WSVPAVAGVD VGGDKKQCDL VILRGSTIVC REARIAPEAL PALCIEHGVV 
AVGVDAPSLW WTGSGRRAAE QALARERISC FPTPSREQAV TSASGFFDWM FMGERVYRAL
AQAYPLLTDA RYAGGNVSFE TYPYAITCAM LGKAIASAKQ KRNQRRQLLA QVGIDVSTLR
SVDARDATLC ALTAQYVIDG NAHAYGDAVG GYIRVPIVSE TIVLDTL