| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5937 |
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| Symbol | |
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| ID | 4314842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 468639 |
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| End bp | 469700 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638153777 |
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| Product | porin |
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| Protein accession | YP_777816 |
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| Protein GI | 115360679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.022245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCGTCTTATC CGCGCTAATT GCCGGTCTGT CACCCTGTCT GTCTCATGCG
CAATCCAGCG TCACGCTGTA TGGCGACATC GGTGGGGGCG TGCGCTGGGT CAATGGTCAG
AAGGGCGGTA GCGCAGTCAT GTTCAACAAC AACATCCTCA CCGTGAATCG TTTCGGCCTT
TACGGCAGGG AAGACCTCGG CAATGGCTTC GCTGCCATTT TCAAGCTCGA AAATGCCTTC
AACAGCGGAA CCGGCGCATT GAAGAGCGCC GGGGTACTCT TCTCGCAGGC AGCGTTCGTC
GGTCTTTCAG GCAGCTTCGG GCGGCTCACC TTCGGCCGCC AGGTCAGCGC GAGCGAGTAT
TTCGCCACGC TCGTCGATCC CACCGGCGGT CAGGCACAGT CGCTCGCCAT CCAGCCCAAC
GCGCTCTACT TCTTCAACTA CTTCACCAAC GAAACCCGTT TTAACAACAC GATCAGCTAC
ATCGGTCGTG CGGGCGGTTT CCGCTTTGGC GCCAGCTATT CGCCGGGCGG CGTCGCCGGC
AATCTGCGCT CGGGCACCAA TGTCTCCGGT ACCGCCATGT ACCAATGGGG CCCGGCGCTC
GGCGGCTTCG GCTATCAGAA GACTTGGAAC GCGACCGCGA CGCAATGGGC CCAGACCTTT
CACGCAGGCG GCTCGCTGCA ACTCGGTCCC GCGCGCCTCT ACATGAGCTA CGCCGATTTC
AGCGTGAGCG CGGCCACTGA ACGCCAACCC ACCCGGCGCG ATCATATTCC GAGCATCGGC
GTCATGGTCG TGGCCACCCC CGGGCTGCAA TTCACGGCCG CCGCGTACTA CGACAGCGCC
CGTCATCTCG CCAATGCCAA AGACGGCAGC GGGCACAAGG TCACGACCTA TGCCATCGCC
GAGTACTACC TTTCGAAGCG CACCGAGCTT TACGCCGAAG TCGACTACAA CGGCTTCTCC
GGCGCCTATC GAACCGACGC CATGAACATC GCGGGGCTCG GCATGCGCAA CGGCGCAAGC
TCGACGACCG GCGTCACGCT CGGCCTCATG ACGCGGTTCT AG
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| Protein sequence | MKKIVLSALI AGLSPCLSHA QSSVTLYGDI GGGVRWVNGQ KGGSAVMFNN NILTVNRFGL
YGREDLGNGF AAIFKLENAF NSGTGALKSA GVLFSQAAFV GLSGSFGRLT FGRQVSASEY
FATLVDPTGG QAQSLAIQPN ALYFFNYFTN ETRFNNTISY IGRAGGFRFG ASYSPGGVAG
NLRSGTNVSG TAMYQWGPAL GGFGYQKTWN ATATQWAQTF HAGGSLQLGP ARLYMSYADF
SVSAATERQP TRRDHIPSIG VMVVATPGLQ FTAAAYYDSA RHLANAKDGS GHKVTTYAIA
EYYLSKRTEL YAEVDYNGFS GAYRTDAMNI AGLGMRNGAS STTGVTLGLM TRF
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