| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5910 |
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| Symbol | |
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| ID | 4314815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 393560 |
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| End bp | 394273 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638153750 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_777789 |
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| Protein GI | 115360652 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0531603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00148471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGCGAACT GGATGGAACA AATCCTGTAC GAAATCGAAG CGACTCATTC TGAGCACGAG
GCTTTCGGAA AAATCGCGAG CGCCGTCAAG GAAATCGGAT TCGAATACAG CGCCTATTGC
CTCCAGACGC CCTGGCCCTT GTCGCGTCGC AAGGTGCTGG TCTTCAGCAA TTTTCCGGAA
CCCTGGCAGC GCCGCTACCA CGACGCGCGC TACATCGACG TCGATCCGCT GCTGCGGCGC
GGGCGCCAGT CCTACGCGCC GGTCATCTGG AGCGATGCCG TCTTCGAGGG GACGCCCCAG
CTCTGGGAAG AGGCGCAGGC ACACGGCCTG CGATACGGCT ACTCGCTGGC GGCGGTATCG
AACTGCGGCG TGTCGGGCAT GATGTCGATG GCCCGCAGCC ACACGCCCCT CACCGTGCGC
GAGCTGCAGC AGCAGGAACT CAAGATGCGC TGGCTGGTGA ACGCGGCGCA CCTGGCGATC
ACCCGCGCGG TGCTTCCCAA ACTCTCGCCG GAAGGCGACA TCGAGCTGAC CGATCGCGAG
GTCGAGGTGC TGAAGTGGGT CGCCGACGGC AAGACCGCTG CCGAGATCTC GATGATCATG
CTGATCTCCG TCTACACCGT GAATTTCCAC GTGAAAAACG CGGTCACCAA GCTCAATACC
TCGAACGCGA CCGCAGCGGT CGCGCGTGCC GCGATGCTCG GCCTGCTCAT CTGA
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| Protein sequence | MANWMEQILY EIEATHSEHE AFGKIASAVK EIGFEYSAYC LQTPWPLSRR KVLVFSNFPE
PWQRRYHDAR YIDVDPLLRR GRQSYAPVIW SDAVFEGTPQ LWEEAQAHGL RYGYSLAAVS
NCGVSGMMSM ARSHTPLTVR ELQQQELKMR WLVNAAHLAI TRAVLPKLSP EGDIELTDRE
VEVLKWVADG KTAAEISMIM LISVYTVNFH VKNAVTKLNT SNATAAVARA AMLGLLI
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