| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5906 |
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| Symbol | |
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| ID | 4314811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 388171 |
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| End bp | 389418 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153746 |
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| Product | major facilitator transporter |
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| Protein accession | YP_777785 |
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| Protein GI | 115360648 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.544672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0068458 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCGA ACCTTCGATC CTCCGCTGCC GCGCCCGCCG ACGCACCGCC CGAACGGGTG
TCGCGCTACG CGTGGAAAGT GCTGGCCGGC TCGGCCATCG GCTATGCGAT GGACGGCTTC
GACCTGCTGA TCCTCGGCTT CATGCTGCCG GCAATTGCGG CGTCGCTGCA CCTCGGCGCG
CAGCAGGCGG GGGCGCTCGT CACGTGGACG CTGATCGGCG CGGTCGCGGG CGGCGTGATT
TTCGGCGCGC TCAGCGATCG CTACGGCCGC GTGCGCGTGC TGACCTGGAC GATCCTGCTT
TTCGCGGTGT TCACCGGGCT GTGCGCGTTC GCACAGGGCT TCTGGGATCT GCTCGCGTAC
CGGACCATCG CCGGCATCGG CCTCGGCGGC GAATTCGGCA TCGGCATGGC GCTCGCGGCC
GAAGCGTGGC CTGCAGCCAA GCGCGCCCGC GTGTCGTCGT ACGTGGCGCT CGGCTGGCAG
AGCGGCGTGC TCGCGGCGTC GCTGCTGACG CCGCTGCTGC TGCAGAGCGT CGGCTGGCGC
GGCATGTTCG CGATCGGCGT GCTGCCCGCG ATCGTCGCCT GGGTGCTGCG CAACAAGCTG
CACGAGCCGG AAGTGTTCGT CCGGAGCCCG CAGCCGGCGC GCACGGGCGC GCGTTTCCGG
CTGCTGTTCG CCGATGCGCG CACGACCCGC ACGAGCATCG GCATCGTCGT GCTGTGCGCG
GTGCAGAACT TCGGCTACTA CGGAATCATG ATCTGGATGC CGACGTTCCT GTCGAAGCAG
CTCGGCTTCT CGCTGACGAA ATCCGGATTG TGGACCGCCG TGACGGTGCT CGGGATGATG
GCCGGCGTCT GGCTGTTCGG ACACCTGGCC GACCGGATCG GCCGCAAGCC GACGTTCCTG
CTGTACCAGC TCGGCGCGGT GGCGATGGTA TTCGCGTATT CGCGGCTGAC GGACCCGGCC
ACGATGCTGT GGGCCGGCGC GCTGATGGGC ATGTTCGTGA ACGGCATGGT CGGCGGCTAC
GGCACGCTGA TGTCCGAAGC GTACCCGACC GCGGTGCGGG CGACCGCGCA GAACGTGCTG
TGGAACGTCG GCCGTGCGAT CGGCGGCCTC GGGCCGCTCG TCGTCGGCGC GCTCGCCGCG
CGCTATTCGT TTCAGATCGC GATCGCGATG CTGGCCGCGC TGTACGTGCT CGACATGATC
GTCACGGTCA CGCTGATTCC GGAACTGAAG GACCGCGCGC TCGACTGA
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| Protein sequence | MEANLRSSAA APADAPPERV SRYAWKVLAG SAIGYAMDGF DLLILGFMLP AIAASLHLGA
QQAGALVTWT LIGAVAGGVI FGALSDRYGR VRVLTWTILL FAVFTGLCAF AQGFWDLLAY
RTIAGIGLGG EFGIGMALAA EAWPAAKRAR VSSYVALGWQ SGVLAASLLT PLLLQSVGWR
GMFAIGVLPA IVAWVLRNKL HEPEVFVRSP QPARTGARFR LLFADARTTR TSIGIVVLCA
VQNFGYYGIM IWMPTFLSKQ LGFSLTKSGL WTAVTVLGMM AGVWLFGHLA DRIGRKPTFL
LYQLGAVAMV FAYSRLTDPA TMLWAGALMG MFVNGMVGGY GTLMSEAYPT AVRATAQNVL
WNVGRAIGGL GPLVVGALAA RYSFQIAIAM LAALYVLDMI VTVTLIPELK DRALD
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