| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5788 |
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| Symbol | |
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| ID | 4314695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 262300 |
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| End bp | 263790 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153630 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_777669 |
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| Protein GI | 115360532 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.520429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGC CAACACCCCC GCTTGCCATC GAAATCGACC GGCACCACCA GTTGCCCGTC
TATCTGCAGA TTTGCGAGCG GTTCAAGGCT GCGATCGCCG CCGGTCATCT GCGCCCCGGC
GATCGCGTGC CCGCGCTGCG CGGCCTGGCG ACGCAACTGA ACACCGCGCG CGGCACGGTT
GAACAGGCCT ACACGATCCT GGTCGACGAG GGCTATCTGC AAATGCGCGG CGCGGCGGGC
ACGTTCGTCG CGCCGTCCCT GCCGGCCTCG CTGACGCAGC CGCCGCCCGC GCGCGCCGAC
CTACAACATG CGTCGCTCGC ACCGAACGTC GATCCGCCGC CACGGCGCCC ACAGCCGATC
GCCGTCGCGC TGAGCGGCGA GCCGCGCCCG CTGCAACCCG GGCTCCCCGC GCTCGACGCG
TTTCCGCGCA AGGTCTGGCA CCGGCTCGTG TCGCAGCGCG CGCGCAGCAG CGAACGCGCA
CTGCTGGCCT ACCCGAATCC GGCCGGCTAC CGGCCGCTGC GCGAACACAT CGCCACCTAT
CTGACGCTGT CGCGCGGCGT CACCTGCGTG CCGGAACAGG TGTTCGTCAC CGGCGGCTAC
CGCGCGACGC TGGAACTCGT GCTGCGCAGC CTCGCGCGCG CGGACGAGCG CGTGTGGTTC
GAGGATCCCG GCTATCTGCT CGCGCGCGGG TTCCTGTCCG AGACCGGCAT ACAACTCGTC
CCCGTACCGG TGGACGCCGA CGGGATCGAC GTCGAGCGCG GCATGCAGCT GGACGCGCAG
GCCCGCTTCG CGCTGGTGAC GCCGTCGCAT CAGAGCCCGC TCGGGCATAC GCTGTCGCTG
TCCCGCCGCA TTGCGCTGCT CGACTGGGCC GAAAAAATGT CCGGGTGGAT CGTCGAGGAC
GACTACGACA GCGAGTTTCG CTACCTCGGC CGCCCGCTGC CCGCGTTGAA GAGTCTCGAC
CGGCGCGATC GCGTGATCTA TTGCAGTACC TTCAGCAAGG CGATGTACCC CGGTTTGCGG
CTTGCCTACG CGGTCGTGCC GGAGCGCGCC GTCGAGCGCG TCGAACGCGT GGCGTGCAGC
ATGAATGCCG GTTCGCCGCC GCTGCTGCAG GCGGCGCTGG CCGATTTCAT CGAGCAGGGG
CACTTTGCCC GGCATCTGAA GCGCATGCGC GCGCTGTACG GCGAGCGCCG CATGCTGATC
GTGCACGCAT TGCGTCAGGC GTTCGGCGAG CGGCTGATCG TCGAATTGCC GGTGGGCGGC
ATCCAGTTCG CGGTGCGATT CACCGACGGG CCCGATGGGC CGGTCGACGA CGTCGCCGTC
GCCGCACGCG CGCGCGAGGC CGGGCTCGCG GTCGTGCCGC TGTCGATCTG GTATACGAAC
AGCCACACGC CGCAAACGCC GCGCGGCCTC GTCATCGGGT TCGCGAACAT CGTCGACGCG
GACGAAGCGC AACGTCACGC AAACACGCTG CGGGCCTGTC TCGACCGCTG A
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| Protein sequence | MSAPTPPLAI EIDRHHQLPV YLQICERFKA AIAAGHLRPG DRVPALRGLA TQLNTARGTV
EQAYTILVDE GYLQMRGAAG TFVAPSLPAS LTQPPPARAD LQHASLAPNV DPPPRRPQPI
AVALSGEPRP LQPGLPALDA FPRKVWHRLV SQRARSSERA LLAYPNPAGY RPLREHIATY
LTLSRGVTCV PEQVFVTGGY RATLELVLRS LARADERVWF EDPGYLLARG FLSETGIQLV
PVPVDADGID VERGMQLDAQ ARFALVTPSH QSPLGHTLSL SRRIALLDWA EKMSGWIVED
DYDSEFRYLG RPLPALKSLD RRDRVIYCST FSKAMYPGLR LAYAVVPERA VERVERVACS
MNAGSPPLLQ AALADFIEQG HFARHLKRMR ALYGERRMLI VHALRQAFGE RLIVELPVGG
IQFAVRFTDG PDGPVDDVAV AARAREAGLA VVPLSIWYTN SHTPQTPRGL VIGFANIVDA
DEAQRHANTL RACLDR
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