Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5647 |
Symbol | |
ID | 4314514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 81261 |
End bp | 82211 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153489 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_777528 |
Protein GI | 115360391 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00735071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.258712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGTA AGCGGTTGCG CGTGCTCACC TGGCACGTGC ATGGCAACTA TCTGTATTAC CTGTCGCAGG CACCGCACGA TTTCTACCTC GTGACGAAGC CGCAGCATCC GCCCGGCTAT GCGGGTCGGG TCGGGCATCT GCCGTGGGGC GACAACGTGC ACGAGGTGAG CGTCGAATGC GTGCGCGACA CCGAGTTCGA CTGCGTGCTG TACCAGCATC ACCGGCACTA CGAGCAAGAC CGGCTGCGAT TGCTGAGCGA TGCGCAGCGG GCATTGCCCG CGCTGTTCGT CGAGCACGAT CCGCCGCGCG AGCATCCGAC CGACACGCTG CATCCGGTGC AGGACCCGAA CATGTTGCTG GTGCACGTGA CGCCGTTCAA CGCGCTGATG TGGGACAACG GTGTCACGCC GACGCGCGTG ATCGAGCATG GCGTGCTGCT GCCCGACGGC ATCGAGTATC GCGGCACGCT GCCGAAGGGC GTGACGGTCG TGAACAACCT CGCGCGGCGC GGGCGGCGGC TCGGCGCGGA CCTGTTCGAG GTCGTGCGCC ACAGCGTACC GCTCGATCTG GTCGGGATGG GCTCGACCGA CCTCGGCGGC ATCGGGGAAG TGCCGAACCC GGCGCTGCCG CAGTTCCTGT CGCACTACCG GTTCTTCTTC AATCCGATCC GCTACACGAG CCTCGGGCTC GCGGTGATCG AGGCGATGAT GATCGGGCTG CCGATCGTCG CGCTCGCGAC GACCGAGATG GCGCAGCTCG TGAAGACAGG TTCGAATGGT GTCGCCGATA CGCGGCCCGA CGTGCTGATC GACGCGATGC GCATGCTGAT CCGCGATCCG GAACTCGCGC GCGAGTGGGG CGCGGCGGCG AAGCGCGACG CGTGCGAGCG GTTCGGCATC GAGCGCTTCG CGCGCGACTG GGACAACGCA TTGCGCGACG TTGCGTCGTA G
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Protein sequence | MSRKRLRVLT WHVHGNYLYY LSQAPHDFYL VTKPQHPPGY AGRVGHLPWG DNVHEVSVEC VRDTEFDCVL YQHHRHYEQD RLRLLSDAQR ALPALFVEHD PPREHPTDTL HPVQDPNMLL VHVTPFNALM WDNGVTPTRV IEHGVLLPDG IEYRGTLPKG VTVVNNLARR GRRLGADLFE VVRHSVPLDL VGMGSTDLGG IGEVPNPALP QFLSHYRFFF NPIRYTSLGL AVIEAMMIGL PIVALATTEM AQLVKTGSNG VADTRPDVLI DAMRMLIRDP ELAREWGAAA KRDACERFGI ERFARDWDNA LRDVAS
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