Gene Bamb_5634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5634 
Symbol 
ID4314501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand- 
Start bp67629 
End bp68240 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID638153476 
Producthypothetical protein 
Protein accessionYP_777515 
Protein GI115360378 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00782523 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0387967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC CCAACTGGAC GATCGCGGCG CTCGCCGCGG GCGTGCTCGC CGTGTCGGGA 
CTCGCGCACG CACAGATGCC GAGCGAGCCG CCCGCATCGA ATTCGCATGT GCCGGGCGGC 
GTGATCAACC CGTCGTCGGG CGCCGCCACG GGCGACGCCG GCATGGCGAA GGCGCCGCAG 
GGCGGCGACG CGGAATTCAT CGACAAGGCC GCGATGGCCG GCAAGGCCGA GGTGCAGGCG 
AGCCAGCTCG CGTTGAAGCA GGCGCAGTCG GCCGACGTGC GCGCATTCGC GAAACGCATG 
GTGGCCGATC ACAGCAAGGC GAACGCGAAG CTCACCCAGA TCGCCGCGCG CAAGGGCATG 
AAGCCGCAGG TCGAGCAGAT CTCGGATCCG GACGTCGAGG CGCTGCGCGG CAAGAGCGGC 
CACGACTTCG ACACCGCGTA TGTCGCGGCG GCCGGCCCCG ACGCGCACCG CAAGGCGGTC 
GCGCTGTTCG AAGGCGAGGC GCGCGACGGC AAGGACGCGC AGCTGCGCGC ATTCGCGAAA 
GCCACGCTGC CGACGCTCAA GCATCACCTG AGCATGGCGG AGGCGCTCCA ACGCAAGGTG 
GGCGCGCAGT AA
 
Protein sequence
MKQPNWTIAA LAAGVLAVSG LAHAQMPSEP PASNSHVPGG VINPSSGAAT GDAGMAKAPQ 
GGDAEFIDKA AMAGKAEVQA SQLALKQAQS ADVRAFAKRM VADHSKANAK LTQIAARKGM 
KPQVEQISDP DVEALRGKSG HDFDTAYVAA AGPDAHRKAV ALFEGEARDG KDAQLRAFAK 
ATLPTLKHHL SMAEALQRKV GAQ