| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5550 |
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| Symbol | |
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| ID | 4314439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2622574 |
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| End bp | 2624799 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153392 |
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| Product | hypothetical protein |
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| Protein accession | YP_777431 |
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| Protein GI | 115360293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACA CGCAAGCAAA ACACACCTAC GCGGGTCCGG CCGCGAAAAC CGAGGAAGAG
GACGTCGTCC TCGGCCAGTT GCTCCAGGTG ATCATGGACG ACATCTGGCT GCTGCTCGGC
ATCGCGGTGA CCGTCATCGC GCTCGCCGGC CTGTACTGCT TCGTCGCGAA GCCGGTCTAT
CAGGCCGACG TGCACGTGCG GGTCGAGGGC AACGACAACA CGTCGCAGGC GCTCACGCAG
ACGCAGACGG GTGCATCGAT CAACAGCGGT CCGCAGCAGG CGCCGACCGA TGCGGAAATC
GAGATCATCA AGAGCCGCGG CGTCGTCGCG CCGGTCGTCG AGGAGTTCAA GCTGAACTTC
TCGGTCACGC CGAAGACGAT GCCGGGGATC GGCAGCCTGG CCGCGCGCAT CGCGACGCCG
GGCGAGCCGT CGCGCGCGTG GTTCGGCCTG CGGTCGTACG CGTGGGGCGG CGAAGTCGCC
GATATCGACT CGATCAACGT CGTGCCCGAG CTCGAAGGCA AGAAGTTGAC GCTGACGGCC
GGCCCGGACG GCACCTACAC GGTGGTCGAC CAGAACGGCC GCCGCCTGTT GTCGGGCCGC
GTCGGCGAAT CGGAGCAGGG CGGCGGCGTC ACGCTGCTCG TGCAGAAGCT CGTCGCGCGT
CCGGGCACGC AGTTCACGGT GGTCCGCTAC AACGACCTCG ATGCGATCAC CGGCTTCCAG
TCGGGCATCC AGGTGAGCGA GCAGGGCAAG CAGACGGGCG TCGTGCAGAT CTCGCTCGAA
GGCAAGAATC CGGACCAGAC GGCCGCGATC GCGAACGCGC TCGCGCGGTC GTACCTGAAC
CAGCACGTGA TCGCGAAGCA GGCCGAAGCG ACCAAGATGC TCGACTTCCT GAAGGGCGAG
GAGCCGCGCC TGAAGGCCGA CCTCGAGCGT GCGGAAGCCG CGCTGACGCA GTATCAGCGC
ACGTCAGGCT CGATCAACGC GAGCGACGAG GCGAAGGTCT ACCTGCAGGG CAGCGTGCAG
TACGAGCAGC AGATCGCCGC GCAGCGCCTG CAGCTCGCGT CGCTCGCGCA GCGCTTCACC
GACTCGCATC CGATGGTGAT CGCCGCGAAG CAACAGCTCG CGGAACTGCA GGGCGAGAAG
GACAAGTTCA GCAACCGCTT CCGCAGCCTG CCGGCGACCG AAGTGAAGGC CGTCCAGCTC
CAGCGCGACG CGAAGGTCGC CGAGGACATC TACGTGCTGC TGCTGAACCG CGTGCAGGAA
CTGTCGGTGC AGAAGGCCGG CACGGGCGGC AACATCCACC TGATCGACTC GGCGTTGCGA
CCGGGCGCCC CGATCAAGCC GAAGAAGGTG CTGATCCTGT CGGCCGCGGT GTTCCTGGGG
CTGATCCTCG GCACCGGCGT CGTGTTCCTG CGCCGCAACC TGTTCCAGGG CATCGAGGAT
CCGGACCGCG TCGAGCGCAC GTTCAACCTG CCGCTGTACG GGCTGGTGCC GCAAAGCGCC
GAGCAGGTGA AGCTCGATGC GATGGCCGAG AAGGGCGGCG GCCGTGCGCG GCCGATCCTC
GCGAGCCTGC GCCCGAAGGA TCTGAGCGTC GAAAGCATGC GCAGCCTGCG CACCGCGATG
CAGTTCGCGA TGATGGACGC GAAGAACCGC GTGATCGTGC TGACCGGCCC GACGCCGGGG
ATCGGCAAGA GCTTCCTGAC GGTCAACCTC GCGGTGCTGC TCGCGCATTC GGGCAAGCGC
GTGCTGCTGA TCGATGCCGA CATGCGCCGC GGGATGCTCG ACCGCTACTT CGGCCTCACC
GCGCAGCCGG GCCTGTCCGA GCTGCTGAGC GATCAGTCGG CGCTGGAGGA CGCGATCCGC
GAGACGCCGG TGCAGGGCCT GTCGTTCATC TCGGCCGGCA CGCGCCCGCC GAACCCGTCG
GAGCTGCTGA TGTCGACGCG TCTGCCGCAA TACCTCGAAG GGCTCGGCAA GCGCTACGAC
ATCGTGCTGA TCGACTCGCC GCCGGTGCTG GCGGTGACCG ACGCGACCAT CATCGGCCGC
ATGGCCGGCG CGACCTTCCT GGTGCTGCGC TCGGGCATGC ACACCGAAGG CGAGATCGCC
GACGCGATCA AGCGCCTGCG TACCGCGGGC GTCGATCTGG AAGGCGGGAT CTTCAACGGC
GTGCCGCCGA AGGCGCGCGG CTACGGCCGC GGCTATGCGG CCGTCCACGA ATACCTGAGC
GCCTGA
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| Protein sequence | MVNTQAKHTY AGPAAKTEEE DVVLGQLLQV IMDDIWLLLG IAVTVIALAG LYCFVAKPVY
QADVHVRVEG NDNTSQALTQ TQTGASINSG PQQAPTDAEI EIIKSRGVVA PVVEEFKLNF
SVTPKTMPGI GSLAARIATP GEPSRAWFGL RSYAWGGEVA DIDSINVVPE LEGKKLTLTA
GPDGTYTVVD QNGRRLLSGR VGESEQGGGV TLLVQKLVAR PGTQFTVVRY NDLDAITGFQ
SGIQVSEQGK QTGVVQISLE GKNPDQTAAI ANALARSYLN QHVIAKQAEA TKMLDFLKGE
EPRLKADLER AEAALTQYQR TSGSINASDE AKVYLQGSVQ YEQQIAAQRL QLASLAQRFT
DSHPMVIAAK QQLAELQGEK DKFSNRFRSL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE
LSVQKAGTGG NIHLIDSALR PGAPIKPKKV LILSAAVFLG LILGTGVVFL RRNLFQGIED
PDRVERTFNL PLYGLVPQSA EQVKLDAMAE KGGGRARPIL ASLRPKDLSV ESMRSLRTAM
QFAMMDAKNR VIVLTGPTPG IGKSFLTVNL AVLLAHSGKR VLLIDADMRR GMLDRYFGLT
AQPGLSELLS DQSALEDAIR ETPVQGLSFI SAGTRPPNPS ELLMSTRLPQ YLEGLGKRYD
IVLIDSPPVL AVTDATIIGR MAGATFLVLR SGMHTEGEIA DAIKRLRTAG VDLEGGIFNG
VPPKARGYGR GYAAVHEYLS A
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