Gene Bamb_5542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5542 
Symbol 
ID4314431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2612324 
End bp2613661 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content68% 
IMG OID638153384 
ProductFe-S oxidoreductase-like protein 
Protein accessionYP_777423 
Protein GI115360285 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACA AGGAAGGTAG CCTCGAAGCC CCGACCCGGC ATCCGCTCGA CTGGCAGTCC 
GAAGCGTTCT ACGACCAGGC CGCGATCGAT GCGGAAATGA CGCGCGTGTT CGACATCTGC
GCGGGGTGCC GGCGCTGCGT GTCGCTGTGC GGCGCATTCC CCACGCTGTT CGATCTCGTC
GACGACACCC CGACGGGCAC CATCGACGAA GTGCCGAAGG CGGCGTTCGG CAAGGTCGTC
GACCAGTGCT ACCTGTGCGA TCTCTGCTAC ATGACGAAAT GTCCGTACGT GCCGCCGCAC
GCGTGGAACG TCGACTTCCC GCACCTGATG CTGCGCGGGA AGGCCGCGCG CTACCAGCGC
GGCGAAGCGC CGCTGCGCGA CAAGGTGCTG TCGAACACCG ACGCGCTTGG CCATTTCGCC
GGCATTCCGA TCGTCACGCA GGCGGTGAAC GCGGTGAACC GCACGCCGCC CGCGCGGCAC
GCGCTCGAAG CGGTGCTCGG CGTCGATCGC GACGCGTGGC TGCCGGAGTT TGCGCCGCGC
AAGTTCCGGC GCACCGCGAA GCGCTCGGAC GGCCCGCCGG TGCGCGACGG CGAGCGCACG
CCCGGCAAGG TCGCGATCTA CGCGACGTGC TACGTAAACT TCAACGAGCC GGGCATCGGC
CACGACCTGC TCGCGATCCT CGCGCACAAC GAGATCCCGT ACGAGCTCGT CACGCGCGAA
GCCTGCTGCG GCATGCCGCT GCTCGAGCAG GGCAATCTCG CGGGCGTCGC CGCGAAGAAG
GCCGTGAACA TGCCGGTGCT CGAGCGCTAT GCGCGCGACG GCTACGCGCT GATCGGCGCG
ATCCCGAGCT GCGTGCTGAT GTACAAGAGC GAACTGCCGC TGATGTTCCC CGACGACGAA
GCCGTGCGCG CGGTGGCCGA CGCATTCTGG GATCCGTTCG AATACGTGAT CGCGCGGCAT
CGCGACGGTT TGCTGAAGAC CGATTTCAAG CAGGGCCTCG GCACCGTGTC ATATCACGTG
CCGTGCCACG CGCGCGTGCA GAACATCGGC CGCAAGACGG CCGACACGCT GTCGCTCGTG
CCCGATACGC GCGTGAATGT GGTGGAGCGC TGTTCGGGGC ACGCGGGCAC GTTCGGCGTG
AAGAAGGGCT TCCATGCGGA TGCGATGCGG ATCGGCGCGC CCGTGTTCAA GGCAATGGCC
GAGCCGCAGC CGGACTTCGT GTCGTCGGAC TGCGCGCTCG CCGGCCATCA CATCGTGCAG
GGCATCGACG AGAAGGGGCT GCCGGCCGCG CCGCTCGCGC ATCCGCTGAC GCTGCTGCGC
CGCGCGTACG GCATCTGA
 
Protein sequence
MPHKEGSLEA PTRHPLDWQS EAFYDQAAID AEMTRVFDIC AGCRRCVSLC GAFPTLFDLV 
DDTPTGTIDE VPKAAFGKVV DQCYLCDLCY MTKCPYVPPH AWNVDFPHLM LRGKAARYQR
GEAPLRDKVL SNTDALGHFA GIPIVTQAVN AVNRTPPARH ALEAVLGVDR DAWLPEFAPR
KFRRTAKRSD GPPVRDGERT PGKVAIYATC YVNFNEPGIG HDLLAILAHN EIPYELVTRE
ACCGMPLLEQ GNLAGVAAKK AVNMPVLERY ARDGYALIGA IPSCVLMYKS ELPLMFPDDE
AVRAVADAFW DPFEYVIARH RDGLLKTDFK QGLGTVSYHV PCHARVQNIG RKTADTLSLV
PDTRVNVVER CSGHAGTFGV KKGFHADAMR IGAPVFKAMA EPQPDFVSSD CALAGHHIVQ
GIDEKGLPAA PLAHPLTLLR RAYGI