Gene Bamb_5491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5491 
Symbol 
ID4314380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2557821 
End bp2558270 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID638153333 
Producthypothetical protein 
Protein accessionYP_777372 
Protein GI115360234 
COG category[S] Function unknown 
COG ID[COG1786] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.982679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CAACGATGAG GCAGCTGACG GGCGACACGC TCGTGCCGGG CAGCGCATGC 
GCGAACACGG TCGTGCTCGA CAAGCCGCTC AGCTTCTGGG GCGGCTACGA CTCGGGCGTG
GGGCGAATCG TCGATTGCGG GCATCCGCAG GCCGGCGCAA GCCTGGCCGG CCGGATCATG
GTGATGCCGC ACGCGAAGGG TTCGAGTTCG AGCAGCAGCG TGCTCGCGGA AGCGGTGCGC
AACGGTACGG GGCCGGTCGG GATCGTGCTG AAGGAGCGCG ACCTGATCAT CTCGATCGGC
GCGATCGTGG CGGCGGAACT CTATGCGATC GCGGTGCCGG TGGTCCGCGT GACGGACGAC
GTGTATGACG CGATTGTCGC GGCGACGGGC GAAGTGCGGA TCGAGGCACG CGAAGGCGAT
GGCGGCGCGC GGATCGACGT CGGCAGCTGA
 
Protein sequence
MTDATMRQLT GDTLVPGSAC ANTVVLDKPL SFWGGYDSGV GRIVDCGHPQ AGASLAGRIM 
VMPHAKGSSS SSSVLAEAVR NGTGPVGIVL KERDLIISIG AIVAAELYAI AVPVVRVTDD
VYDAIVAATG EVRIEAREGD GGARIDVGS