| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5471 |
|---|
| Symbol | |
|---|
| ID | 4314360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2533185 |
|---|
| End bp | 2535047 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153313 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_777352 |
|---|
| Protein GI | 115360214 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.407039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTCT GGCGCAAGCT GTCCATTCAG AACAAGCTGA TTCTCAGCAT GACGAGTTGC
CTGCTCGTGT TCGTCGCGAT CTCGAGCGGG TTGAGCGTCC GCCTGATCGG TCACGCGGTG
CGCGATCGCG TCGTCCGCGA AGAGTTGCCG ACGGCCGTCA GCGGCATTCG CGCCGACGTG
CAGCGGCAGA TGGCCGGGCC GATCGCCGCG TCGCGCCTGC TCGCGCGCGA TGCGTTCCTG
CTGCAATGGG AAGCCGACGG CGAGCCCGAC GCCGGCACGC GCAACTGGAT CCAGCTTGCG
AAGAACGTGA AGGACGAGCA GAAGGCGGCG TCCGTGCAGT GGGTGTCGGT GAAGAGCGGC
AACTACTACA ACGAAGGCGG CCTGCAGCGC AAGGTCACCG ACGAGGATCG GTGGCTGACG
AACTTCCTCG CATCCGGCAA GGCCTTCGAC GTGAACATGG ATCGCGAAGT CACGCTCGGC
GGCTACATGA TGTTCATCAA CAGCCGCGTG GAGCTCGACG GCACGCCGAT CGGCGCGGCC
AGCATGAGCC TGTCCGTCGA TGCGCTTGCG AAGGGCATCG CCGCGTACCG GATCGGCGAC
ACCGGGTTCG CGTACCTCGT GCGGCCGGAC GGCGCGTTCA TGATGCATCG CGATACGTCG
CTGATCGACG GCAAGCACTT CCTGAAGGAC GAAGCGGGCC TGCCCGGCGA CGCGGCGTCG
ACGCTGCTGG CCGGCAAACC GTATGCATAC CTGAGCTACG ACGGCGACGG CGGTGCGCGC
TTCATCGCGA CGTCGTTCAT TCCGGAGCTG AATGCGTATG TAGTCGTCGA AGTGCCGCAG
GCCGAACTGC TTGGCCCGGT GACACGCGCG ATTCGCAGCG CGGCGCTGGT CGCCGCGGTG
GTGGGCCTCG GCGTCGCGCT GGTCGTGATC TGGCTGGTCG GGCGCGCGAT CGCCGCGCCG
ATCCGCCGCG CGGCGACGCT GCTGTCCGAG ATCGCGAGCG GCCAGGGCGA CCTGACGCGC
CGGATGACGG TCGAGAGCGA GGACGAGATC GGGCAGTTGT CGGACGCGTT CAACCGCTTC
GTGTCGTCGT TGTCGACGCT CGTGCACCGG ATTCGCGCGG CGTCCGCGTC GATCGCGACC
GGCTCCGCGC AGATCGCGTC GGGCAACGCG GATCTCAGTG AGCGCACCGA AGGACAGTCG
AGCAACCTCG AGCGCACGGC TTCGTCGATG GAGGAAATCA CGGCGGTCGT GCGCAACAAC
ACCGAAACCG CGACCACGGC CGCGAAGCTG ATCACCGGCG CATCCGATAC GGCGTCGCGC
GGCGGGCAGG TCGTCGGCGA AGTCGTGTCC ACGATGGAGC AGATCAGCGA TGCGTCGCAA
CGAATCTCCG AGATCATCGT GATGATCGAC AGCATCTCGT TCCAGACGAA CATCCTCGCG
CTGAATGCCG CGGTCGAGGC GGCACGGGCT GGCGAACAGG GGCGCGGGTT CGCGGTCGTC
GCCGCGGAAG TGCGGAATCT CGCGCAGCGC AGTGCGCAGG CGGCGAAGGA GATCAAGGCG
CTGATCGAGC ACAGCGCGGG CACGGTGAAC ACCGGGTCGC GGCTCGTCAG CGAGGCCGGC
AAGGTGATGC GCGATGTCGT GTCGCAGGTG CAGGGCGTCA GCGCGATGAT GAGCGAGATC
GCCGAGGCGA GCCTGGAGCA GAGCGCGGGC ATCGACCAGA TCGGCGACGC GGTGCAGTCG
CTCGATCAGA TGACGCAGCA GAATGCGGCG CTGGTCGAGG AGAGCGCGGC GGCCGCTGAG
AGCCTGAAGC AACAGGCGGC GGAACTGACG CGACTGGTAT CGGCGTTCAA GGTCGACGAA
TGA
|
|---|
| Protein sequence | MHFWRKLSIQ NKLILSMTSC LLVFVAISSG LSVRLIGHAV RDRVVREELP TAVSGIRADV
QRQMAGPIAA SRLLARDAFL LQWEADGEPD AGTRNWIQLA KNVKDEQKAA SVQWVSVKSG
NYYNEGGLQR KVTDEDRWLT NFLASGKAFD VNMDREVTLG GYMMFINSRV ELDGTPIGAA
SMSLSVDALA KGIAAYRIGD TGFAYLVRPD GAFMMHRDTS LIDGKHFLKD EAGLPGDAAS
TLLAGKPYAY LSYDGDGGAR FIATSFIPEL NAYVVVEVPQ AELLGPVTRA IRSAALVAAV
VGLGVALVVI WLVGRAIAAP IRRAATLLSE IASGQGDLTR RMTVESEDEI GQLSDAFNRF
VSSLSTLVHR IRAASASIAT GSAQIASGNA DLSERTEGQS SNLERTASSM EEITAVVRNN
TETATTAAKL ITGASDTASR GGQVVGEVVS TMEQISDASQ RISEIIVMID SISFQTNILA
LNAAVEAARA GEQGRGFAVV AAEVRNLAQR SAQAAKEIKA LIEHSAGTVN TGSRLVSEAG
KVMRDVVSQV QGVSAMMSEI AEASLEQSAG IDQIGDAVQS LDQMTQQNAA LVEESAAAAE
SLKQQAAELT RLVSAFKVDE
|
|---|
| |