| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5444 |
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| Symbol | |
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| ID | 4314333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2494221 |
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| End bp | 2496047 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153286 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_777325 |
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| Protein GI | 115360187 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.910139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCG CGCGGCTCCG CATTGCCGCA CCACTCGCGC TGGCAATCGG CGCGACGTCG
CCGTGTGCGT ATGCGCAGCT CGCGGGTGCA CTGCCGGCCG GCCCGCTGCC CGGTCTCGGC
CCGGTGCCGT CCGGCTTCGC GGTGCCGCGT GCGGAGCAGG ATCCCGCGCA GCGTTTGCTG
CAGGAGCAGC GCGATAGACA GCGCCGCGAC GAGATTGCGC AACCGCCGGC ACAGATCGCG
TTGCCCGAGC AACCGGCGAT GCCGGATCTG CCGCAGGGCG CCGACATCGA GACGCTGCCG
GACATCGCGC CGACCTTCGC GATCGATCGA ATCGAATTCA CCGGCGACAC GATACTCGGG
CAGCCGGAAC TGGACCGCAT CGCGGCGCCG TTCATCGGCA AGCAGCTCGG ACGCAACCGC
ATCAACCTGC TGCTGCGCCG GCTGACCGAA GCATTCATCG CGCGCGGCTA CATCACGACG
CGTGCGTATC TCGGCCCGCA GAATCTCGCG TCAGGCACGC TGAAGATCAA TCTCGTGGCC
GGGCGCGTGG CCGCGCTGAC GCTGAACGGC AAGCCATTGC GGCCGCGCGA TCCGGACGAG
AAGTGGTACG AAGTGCGGGG CGGTGGGCTA CTGACGGAAG CCGGCACCGC ATGGGCATTC
GCGAGCGCGC CGGGCGACGT GCTGCGCCTG CCCGACCTCG AACAGGGCGT CGATCAGATC
AACCGGCTGC GGCGCAATCA GGCTGAAATC CGGATTCTGC CCGGCGAAGC ACCGGGCGAT
TCGATCGTCG CGATTTCGAA CCGCTACGGC GATCGGCTTC ATTACGATTT CGGCATCGAC
AACTACGGCA GCTCGCAGAC AGGTACGACG CGCTATCGCG CCGGTGTCGA AGCCGACAAC
GTGATCGGAC TGCAGGAGTC GTTGTCGTTC AGCTACGTCT GCACGACCGA CACGAATGCG
GTCGTGTTTT CCGCAGCGGT GCCATACGGG TATCAGACCT TCAGCTACAC GGCGTCGATG
TCCGAGTACC AGCAGGCGAT CGGCGACGTC GCGCTGCTCG CGGGGCGCAC GTTCAGCCAG
ATGCTCGGCT GGAACGACGT GCTGGTGCGG TCGCCGCGCG GGCGCATGAG CATCGACGTG
ACGCTCAACA AGCTGCGCAC CGAGCGCGAC GTCAACGGCA TTCCGTTGTC GCCGCAGAAC
CTGACGGTGC TGCGCGTCGC TCTGAACGGG TTGTCCCGCT TCGTCATGCG CGATCAGGGT
GCGGCAGCGA CATGGGATAT CGGCGTATCG CAGGGCTTGC CGTGGCTTGC GGCCAACCAC
GACGCATCCG AGATCGGCAT CGACGACGCG CACAGTCAGT TCACGAAGCT CGATGCCACC
GGCACGCTGC AATTCGCGCT CGGCAATCTG GCCGGATCCG CGTGGGCCTA TCGCGGCACG
CTGCGCGCGC AGTACAGCCG CGTTGCGCTG TTCGGCAACG AGCAGATCTT TCTCGGTGGC
ATGGGCTCGG TCCGCGGGTT TACCGAAGGC GGGATCGCGG GCGACAGCGG CGCGTTCGTG
CGCAACGAGC TGGCCTGGCA AAACGTGCCC GCATGGCATG ACGCACGCAT CGAGCCGTAC
GTATTTCTCG ATGGCGGAAA AACGCACCTG AACGCGCAGG GCGGCTGGCC GTCGCTGGTC
GGCACGGGCG TCGGCACGCG CGCGCAATGG CGCCTGAAAG GTGGGACCGT GTCGGCCGAA
GTGCTGGTCG GGCAGGCGCT GGCGCAACCC GCCGCACTCG GCAAGAAGGC AACCGTGCTG
CTGGCAACAC TCAACTGGAC GGACTGA
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| Protein sequence | MSRARLRIAA PLALAIGATS PCAYAQLAGA LPAGPLPGLG PVPSGFAVPR AEQDPAQRLL
QEQRDRQRRD EIAQPPAQIA LPEQPAMPDL PQGADIETLP DIAPTFAIDR IEFTGDTILG
QPELDRIAAP FIGKQLGRNR INLLLRRLTE AFIARGYITT RAYLGPQNLA SGTLKINLVA
GRVAALTLNG KPLRPRDPDE KWYEVRGGGL LTEAGTAWAF ASAPGDVLRL PDLEQGVDQI
NRLRRNQAEI RILPGEAPGD SIVAISNRYG DRLHYDFGID NYGSSQTGTT RYRAGVEADN
VIGLQESLSF SYVCTTDTNA VVFSAAVPYG YQTFSYTASM SEYQQAIGDV ALLAGRTFSQ
MLGWNDVLVR SPRGRMSIDV TLNKLRTERD VNGIPLSPQN LTVLRVALNG LSRFVMRDQG
AAATWDIGVS QGLPWLAANH DASEIGIDDA HSQFTKLDAT GTLQFALGNL AGSAWAYRGT
LRAQYSRVAL FGNEQIFLGG MGSVRGFTEG GIAGDSGAFV RNELAWQNVP AWHDARIEPY
VFLDGGKTHL NAQGGWPSLV GTGVGTRAQW RLKGGTVSAE VLVGQALAQP AALGKKATVL
LATLNWTD
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