| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5443 |
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| Symbol | |
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| ID | 4314332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2492029 |
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| End bp | 2494221 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153285 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_777324 |
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| Protein GI | 115360186 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.34159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCC GGCGAAGCCG CGTGCTTGAT CAGAAGATGG GACGCACCGA TTCGAAGGGG
CGCGTGGGCA TCGGGAGCCG GCGCGTACTG TGCTTTTGCC TGGCCGCGGC GGGACTGCTG
CCGCATTGCG CGGCCGCTGC GGGCATCGTC CCGGACGGCG GCACGCCGAC GAGCGTGTCG
AACGCGCCGA ATGGCCGGCA GCTCGTGAAT CTCGCGCCGG CTGTCGCCGG CGTATCGAAC
AACACGTATT CGTCGTTCAA CGTGACGACC GCCGGCGCAA CGCTGAACAA CGCCGGCATC
AACGCGCGCA CGATCGTCAA CCAGGTGACG AGCACGAACC GGAGCCTGAT CGAAGGCGAA
ATCGCCGTGG CGGGGCCGCG CGCGAACGTC GTGCTCGCCA ACCCGAACGG CATTACGGTC
AACGGTGGAT CGTTCGTCAA TACCGGGCAC GTGGCGCTGT CCACTGGCAA TGTGACCTTC
AACGACCTGC AGATCGCGCC CGGCGTCATT CAGCGCAACG TCGTGCTCGA TACGTCGACC
GGCACGATCG TCGTCGGTCC GGGCGGCTTG GCCGGTGCGT TGATCGGGCT GGATTTGATC
GCGAAGAACA TCGTCGTCGA CGGTCCGATC AACAACACGT TCTCGTCCGC GACCGCCGGC
GCGCGCCTGC TCGCCGGCCG CAGTCGCGTC GAGCTGAACA CGGGGCTGTC GCCGAACGAC
AACGCCAACG ACTGGCTCTC GCGCAGTGCG ACCACGGATC CGGACACCGC ATCGTCCTAC
GCGATCGACA TCACCGCCGC GGGCAGCGTG ACGAGCGGCC GCGTGCAGTT GATTGTCACG
GACCGCGGCC CCGGTGTGCG CAGTGCCGGC GCGATGAATG CGTCGCTCGG TGATTTCACG
CTGGCATCGA ACGGCAACGT CGAGATGTCG CATGCGAAGA TCGGCGTCGC GCGCGACCTC
GACGTTACCG TGCAGGGCGG CATCGCGCTG AACGACACCG AAATGAAGTC GACCGGTGGC
CACGCGAATT TGTCCGCCGC CGATGCGATC GCGTTGACCG GCAGCAGCCT GATGGCTTCG
GGCAGCATAA AGCTGAATGG CACGCGGATC GCGCTGACGC CCGACGATGC GATGAAGGGT
GCCACCGTGG CGTCGACGCA AAGCGGCGTC GTGCTCAAGA GCGCGGCGGA CATCGTGAAC
ATCGGCTCGC TCGTGCAGGG GCAGACCGCG ATCGACGGGG ATTCGGATTC GGCCGGCGCG
GTGACACTGA ATGCGGCGGG GCGCATTCTG AATCAGTCGC TGCCGCAGAC GCAGATCGGC
ATTCTGTTCG GCGTGCAAGG CGACGTGTCG CTGACCGCGG GTGCCGATGT CGTCAATCAG
AATGCACGGA TCCTGTCGAA CCGCAACGTT TCGATCGACG CGGGCGGTGA CCTGCAGAAC
ATCGTCGACC ACAGCACCGG CGTGCGGAAT GGTGCGGTGG TCGGCTTCTC CGACCAGGGC
GGCCGCTTCC TGTTCCTCAA GCATCGTAGT GACGGATTCA CCGTCGATTA CGGCGGGCTC
GACGACGCAT CGAAGCTCGC GTACATCACG GCCGACGCGG GGAATGTATC GGTGCGTGCC
GCGAACGTGA CGAATATCGG CGGGTCGATC CTGTCGAATG GCGGCGCAAT CGACATCGCC
GCGCGTGACA ACATCCTCAC GCAGGCCATT TTCACCGGGC AGGCATCGTA CCGACGCTCG
TGCTTCGTGT TCTGCCGCGC GAGCGCATCG TCGAGCGTGC AGGCGTTCGG CGGCGTGATC
GAGGCCCAGT CCGACATTCA GCTGAAGGCC GGCACGCAGA TCACGAACAC TGGTGGAACG
GTGCTCGCGC TCGGCGCACT GACGCTCGAC GCGCCGAAAA CGCTCGCGCA GGGCGTGCCG
GGCTACACCG TGATCAACCG CAACCACGAC CTGAAGGCAT GGTTCGGCAA TCGCTGGGCG
GCCATTTATG CAGCCGACAC CGGTGGCGTT TTCACTGGCG GAACCGGCAA GGTACGCCTG
ACTGGTGAGG CCGATATCGA CGGCGGCGCG TACAGCGCGC CCGACGGGGC GGCGGCGGCG
GGCGGCATCG TGACGATCCG GCCGCCCCAT CGCGATCTCG TGACGGTCGG CAACCGCAAT
CACATGGGGC TCGTGTCTTG GTTCGGTCTG TGA
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| Protein sequence | MHGRRSRVLD QKMGRTDSKG RVGIGSRRVL CFCLAAAGLL PHCAAAAGIV PDGGTPTSVS
NAPNGRQLVN LAPAVAGVSN NTYSSFNVTT AGATLNNAGI NARTIVNQVT STNRSLIEGE
IAVAGPRANV VLANPNGITV NGGSFVNTGH VALSTGNVTF NDLQIAPGVI QRNVVLDTST
GTIVVGPGGL AGALIGLDLI AKNIVVDGPI NNTFSSATAG ARLLAGRSRV ELNTGLSPND
NANDWLSRSA TTDPDTASSY AIDITAAGSV TSGRVQLIVT DRGPGVRSAG AMNASLGDFT
LASNGNVEMS HAKIGVARDL DVTVQGGIAL NDTEMKSTGG HANLSAADAI ALTGSSLMAS
GSIKLNGTRI ALTPDDAMKG ATVASTQSGV VLKSAADIVN IGSLVQGQTA IDGDSDSAGA
VTLNAAGRIL NQSLPQTQIG ILFGVQGDVS LTAGADVVNQ NARILSNRNV SIDAGGDLQN
IVDHSTGVRN GAVVGFSDQG GRFLFLKHRS DGFTVDYGGL DDASKLAYIT ADAGNVSVRA
ANVTNIGGSI LSNGGAIDIA ARDNILTQAI FTGQASYRRS CFVFCRASAS SSVQAFGGVI
EAQSDIQLKA GTQITNTGGT VLALGALTLD APKTLAQGVP GYTVINRNHD LKAWFGNRWA
AIYAADTGGV FTGGTGKVRL TGEADIDGGA YSAPDGAAAA GGIVTIRPPH RDLVTVGNRN
HMGLVSWFGL
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