Gene Bamb_5428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5428 
Symbol 
ID4314317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2475086 
End bp2476381 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content67% 
IMG OID638153269 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_777309 
Protein GI115360171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC AGGCCGCATC GAACTGGCGC CTCGAAACCA TCGCCGTGCA CGGCGGTTAT 
CGCCCCGACC CGACCACGCG CGCGGTCGCG GTGCCGATCT ATCAGACCGT TGCGTACGCA
TTCGACGACA CGCAGCACGG CGCCGACCTG TTCGACCTGA AGGTCCAGGG CAACATCTAC
ACGCGCATCA TGAACCCGAC GACGGACGTG CTCGAGCAGC GGATCGCCGC GCTCGAGGGC
GGCATCGGCG CACTCGCGCT GGCGTCGGGC CAGGCGGCCG TCACGTACGC GATCCAGACG
ATCGCGGAAG CCGGCGACAA CATCGTGTCC GCCAGTTCGC TGTACGGCGG CACCTACAAC
CTGTTCGCGC ATACGCTGCC GCAATACGGG ATCACGACGC GCTTCGCCGA TCCGCGCGAC
CCCGCATCGT TCGAGCCGCT GATCGACGCG CACACGAAGG CGATCTTCGC GGAATCGGTC
GGCAACCCGC TCGGCAACGT AACCGACATC GCCGCGCTCG CCGACATCGC GCATCGCCAC
GGGATCCCGC TGATCGTCGA CAACACGGTG CCGTCTCCGT ACCTGCTTCG CCCGTTCGAA
CATGGCGCGG ACATCGTCGT GCACTCGCTG ACGAAGTATC TCGGCGGCCA CGGCACGAGC
CTGGGCGGCG CGATCGTCGA TTCGGGCAAG TTCCCGTGGA CGCAGCACGC GGATCGCTTC
AAGCGGCTCA ACGAGCCCGA CGTCAGCTAT CACGGCGTCG TCTATACGGA AGCGTTCGGG
CCGGCTGCCT ATATCGGCCG CGCGCGCGTC GTGCCGCTGC GCAACATGGG CGCAGCGATC
TCGCCGTTCA ACGCGTTCCA GATCCTGCAG GGCATCGAGA CGCTCGCGCT GCGCGTCGAG
CGCATCAGCG ACAACGCGCT GAAGATCGCG CAGCATCTCG CGCGCCATGA AAACGTCGAA
TGGGTGAACT ACGCGGGACT GCCCGATCAC CCCGACCATC CGCTCGTCGC GCGCTACCTG
TCGGGCCGCG CGCCCGGCAT CCTGACCTTC GGCGTGAAGG GCGGCCGTGA CGGCGGTGCG
AAGTTCCAGG ACGCGCTGAA GCTGTTCACG CGGCTCGTCA ACATCGGCGA CACGAAGTCG
CTCGCAACGC ATCCGGCGTC GACGACGCAC CGCCAGCTAT CGCCCGCCGA ACTCGCGAAG
GCCGGCGTGA AGGAGGAAAC CGTGCGGCTG TCGATCGGCA TCGAGCATAT CGACGACCTG
CTCGCCGATC TCGATCAGGC GCTCGCGCAG GTATGA
 
Protein sequence
MTDQAASNWR LETIAVHGGY RPDPTTRAVA VPIYQTVAYA FDDTQHGADL FDLKVQGNIY 
TRIMNPTTDV LEQRIAALEG GIGALALASG QAAVTYAIQT IAEAGDNIVS ASSLYGGTYN
LFAHTLPQYG ITTRFADPRD PASFEPLIDA HTKAIFAESV GNPLGNVTDI AALADIAHRH
GIPLIVDNTV PSPYLLRPFE HGADIVVHSL TKYLGGHGTS LGGAIVDSGK FPWTQHADRF
KRLNEPDVSY HGVVYTEAFG PAAYIGRARV VPLRNMGAAI SPFNAFQILQ GIETLALRVE
RISDNALKIA QHLARHENVE WVNYAGLPDH PDHPLVARYL SGRAPGILTF GVKGGRDGGA
KFQDALKLFT RLVNIGDTKS LATHPASTTH RQLSPAELAK AGVKEETVRL SIGIEHIDDL
LADLDQALAQ V