Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5374 |
Symbol | |
ID | 4314263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2418951 |
End bp | 2419745 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153215 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_777255 |
Protein GI | 115360117 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.628457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA ACGGCCCTTT CGCCCTGGCG TTCCATACGC TCGTGATCCT GTTCGTGCTC GCGCCGCTCG CGATCGTCGT GCTCGTCGCG TTCACGCCCG ACGAAACGCT GACGCTGCCG ACGCACGGGC TGTCGCTGCG CTGGTTCCGC GCGATCCTCG ACTATCCCGA CTTCGTCACC GCGTTCGCCA ACAGCGTGAA GCTCGCGTTC GCGTCGGCGA CGCTGTCGCT CGCGATCGCC TTGCCCGCCG GGCTCGCGAT CGGCCGCGCG ACGTTTCCGG GCCGCGCGTT CCTGAACGGG CTGCTGCTAT CGCCGCTCGT GATTCCCGGC CTCGTGCTCG GCATCGCGCT GCTGCGCTTC TTCGCGCTGA TCGGCGCGAC AGGCTCGTTC GCGTGGCTGG TGCTCGCGCA CATGATCGTC ATCACGCCGT TCGTGATGCG GCTCGTGCTC GCGTCCGTCG CGGGCCTCGA CCGCAGCATC GAGCAGGCCG CGTGCTCGCT CGGCGCCGAT CCGTGGACGA CGTTTCGCCG CATCACGCTG CCGATGATCG TGCCCGGCAT CACCGGCGGC TGGCTGCTCG CGTTCATCAA CAGCTTCGAC GAGCTGACGA TGTCGATCTT CGTCACGTCG CCGCAGACGA TCACGCTGCC GGTCCGCATG TATATGTACG CGACCGAATC GATCGATCCG ATGATGGCGT CGGTATCGAC GCTCGTCATC CTCATCACCG CCGGCGCGAT GCTGCTGCTC GATCGCGTGT ACGGCCTGAA CCGCATCCTG ATCGGCCAAC ACTGA
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Protein sequence | MSKNGPFALA FHTLVILFVL APLAIVVLVA FTPDETLTLP THGLSLRWFR AILDYPDFVT AFANSVKLAF ASATLSLAIA LPAGLAIGRA TFPGRAFLNG LLLSPLVIPG LVLGIALLRF FALIGATGSF AWLVLAHMIV ITPFVMRLVL ASVAGLDRSI EQAACSLGAD PWTTFRRITL PMIVPGITGG WLLAFINSFD ELTMSIFVTS PQTITLPVRM YMYATESIDP MMASVSTLVI LITAGAMLLL DRVYGLNRIL IGQH
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