| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5359 |
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| Symbol | |
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| ID | 4314248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2401122 |
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| End bp | 2402252 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153200 |
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| Product | porin |
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| Protein accession | YP_777240 |
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| Protein GI | 115360102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.292845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.581333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC CGAACGGGCG GGCCGACCAG CTTGCCGTAC CGCGTGCCAC GCTGGTTGCC
GCGCTCCTGG CGTGCGCGTC GCTGCCGGCC CTCGCGCAAT CGAGCGTGAC GCTCTACGGC
CGCATCGACA CCGCGATCGA ATACGCGAAC GCCGGGCCGA ACCACGTGAC GCGCATGGGC
AGCGGCAACC TGTGGGCGTC GCAGTGGGGG TTGAAGGGCG TCGAGGATCT CGGCGGCGGC
TACGCGGCGA TCTTCAAGCT CGAGGACGGC TTCAACGCGG CGAGCGGCGC GCTGTCGAAC
AGCAGCGCGC TGTTCGGCCG CGAGGCGTGG GTCGGCATTA CCGGGCCGTT CGGCGGCGTG
CAGTTCGGCG AGCTCTACAC GATCCTGCAC ACCACGCTCG TCACGTACAG CCTGCCCGGT
CTCGGCGCAG GCCTCGCGTG GGGCAACGCG ACGAACAACT TCGTCGGGCC CGCGTTCCTG
CGCGTGCGCA ACTCGATGCG CTACACGTCG CCGCGCTACG CCGGCTTCCT GCTCCGCGCG
ATGGCCGCGC GCGGCACCAA CGGCGCGACC GGCCAGCCGG CGACGCTCGG CGATACGTAC
GGCGCGGGCC TCAACTACGC GCGCGGCGGA TTGTCGGTCG ACGTCGACTA CATGCAGCAG
AAGTTCAGCC CGGTCGCCGC ATCCGCGCTC GGTGCCACGA GCACGGCCGC GAACGGCAAC
TACACGCTCG GCGCGATCTC GTACGACTTC AGCGTCGTGA AGATCGCCGC GCTGTACATG
CGCCATCGCG GCGGCCCCGA CGTCGGGGCC GCGATCGACA GCCAGAGTGC GTATCCGCAC
AGCGACACGA TGGAGCTCAG CGCGACGGTG CCGATCGGCC GCGCGTCGCT GCTGCTGAGC
ATCGGCCACT ACCGGAAGGT CGCGGACAGC GACGGCAACG CCGATTCGTA CGGCATCCGC
TTCGACTATC CGCTGTCGAA GCGCACGGTG CTGTACACGG GCGCGGCGAT GGTGCGCAAC
GGCGCGCATG CGCGCTTCGT CGTGAACGGC GCGGCGGGCG GCGGCGTCGC GGTCGCGAAA
CCCGGCGCGA CCGCCAGCTC GATCGTCGCG GGCATCCTCA CGTCGTTCTG A
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| Protein sequence | MNHPNGRADQ LAVPRATLVA ALLACASLPA LAQSSVTLYG RIDTAIEYAN AGPNHVTRMG
SGNLWASQWG LKGVEDLGGG YAAIFKLEDG FNAASGALSN SSALFGREAW VGITGPFGGV
QFGELYTILH TTLVTYSLPG LGAGLAWGNA TNNFVGPAFL RVRNSMRYTS PRYAGFLLRA
MAARGTNGAT GQPATLGDTY GAGLNYARGG LSVDVDYMQQ KFSPVAASAL GATSTAANGN
YTLGAISYDF SVVKIAALYM RHRGGPDVGA AIDSQSAYPH SDTMELSATV PIGRASLLLS
IGHYRKVADS DGNADSYGIR FDYPLSKRTV LYTGAAMVRN GAHARFVVNG AAGGGVAVAK
PGATASSIVA GILTSF
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