Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5332 |
Symbol | |
ID | 4314221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2373684 |
End bp | 2375702 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638153173 |
Product | DedA family membrane protein |
Protein accession | YP_777213 |
Protein GI | 115360075 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.239608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CGATCCACGC ATGGCTGGGC GCGATCAGCG CGCATCCGCT ACTCGTGCTG GCGATCGTGT TCGTCACCGC CTGCGCAGAG GCGATCGCGC TGATCGGCAC GGTCGTGCCG GCCGGCGCCG TGATGTTCGC GGCCGGCACG CTGATCGGTG CGGGCGCGCT CGACGGCTGG ACGACGATCG GCGTCGCGGC CGCCGGCGCA GTCGTCGGCG ACGGCATCAG CTATGAGATC GGCCGCCGCT ATGGCGGCGC GATTCGCAAC GGCTGGGTGC GGCTCGGCTA CGCGGACGCC TATGCGCGCG GCGAGCAGTT CGTGCTGCGC CACGGAATGA AGAGCATCGT GCTCGCGCGC TTCCTGGCAC CGCTGCGCGC GGTCGTGCCG GTCGTGGTCG GTTGCGCGAT GCTGCCGCGC CGGTCGTTCT ATCCGGTCAA CGCCGTGTCG GCGCTGATCT GGGCACCCGT GCACATCGCG CCGGGCATCG TGTTCGGCGC GTCGGCGGCG CTGGCCGCGG CAATCAGCGT GCGGGTCGCC GCGATCCTGC TGGTGGTCGC CGCGCTGGTC GCGCTCGTGT GGTTCGGCGT GCGCCTGGCG CTGCGGCGCG GCTGGCCGTT GCTGTGCCAG GCGACCGGCG CGGCCGTGCA TGCATCCGCG CGCCGCTGGC CGCGCTTCGG CGCGTGGCTG CACGACGCGA TCGGCAAGGT GCGCCGCCTG CCGGGCGCGG TGCCCGTGTT CGCGCTGCTG TTCCTCGGTT GCGTGTGGCT GTTCGCCGGC ATCGTGCAGG ACGTCGTCGC GAACGATCCG CTGACGCACG CGGACATCGC GCTGTATGCG TTCCTGCAGA ACCTGCGCAC GCCGCCCGTG GACGCCACGA TGCGCGCGCT CGCGGTGCTG CACGGACACG ATACGGGGCT GATCGTCGCG GCCGCGTTTC TCGTCTGGCT GATGATCCAT CGCTGCTGGG TGACGTCCGC GTGGTGGCTC GCGACGCTCG GCATCGCGGT CGTGCTCGTG CCGGCGTTCG GCGCCGGCGT GCCCGGCATG TCGCCCGCGA GCCTGCCGCC CGGCGCGCTG CACGTGGCGC TGCCCGACGC CGACGCGGCG TTCGCGATGC TCGCGAGCAG CGGCATCGGC TGGGTGCTGA CGCGCGAGCG GCCCGCGTCG TGGCGGATCC CGGTCGTGAC GGCGGTCGTG CTGTGGATCG TGCTCGGCGG CTTCGCGCGG CTCTATGTCG GCGATACGTG GCTGTCGGGC CTGCTCGGCG GCTGGTGCCT CGGGCTCGCG TGGTTCGCGG TGCTGGCGGG CGCCCATGCG TACTGGCGGG TGCACGAACA CGTGCAGCCG CGCGGCGCGC TCGTCGCGGT GCTCGTCGTG CTCGCCACCG CCGGCGTGTG GACCGTGCCC GCGCAGTGGC AGCTCGATCG CGCGGCGCGT CCGCATGTCG GCGACGTCGT CGCGATGACC GTCGACCAGT GGATGCGCGG CGGGTGGCAG CGCGTGCCGA CGCGGCGCAC CGAGATCGGC GGCGATCGCG AGGAATATCT GCCGCTGCAA TGGTGCGCGA CGTCGGACAC GCTCGACCGC CATCTGTCGC TGGCCGGCTG GCAGCGCGCG ACGCCGTGGT CGCCCGCCAC CGCGCTGCAC TGGCTGTCGC CGCAGGCGCC GGCCGAGACG CTGCCCGTGC TGCCGCGCTA CACGCACGGC GAGAGCACGC GCCGCGTGTT CGTGCGCGTC GACGCGGCCC ATCCGGACAG CCGCCTCGTG CTGCGGCTAT GGCGTTATCC GTACGTGCTG CAGGATGCGC TCGGCATGCG GCCGCTGTGG TACGGCGCGC TGTATCGCGA GACGCTGCAT CGGCCCGCGC GGGTGATGAC GGTCGTGCGC ACGACGCCGC TCGACGACGC GGCGACGATC GCGCAGGCGC TGAAGGTCGA GCCGACGATC GAGCGGCCGC CGGCGGGGAT GAGCGCGGCG CCGCCCGCGA TGACGCTCGT GTGGATGGTG CAGCCTTGA
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Protein sequence | MSDTIHAWLG AISAHPLLVL AIVFVTACAE AIALIGTVVP AGAVMFAAGT LIGAGALDGW TTIGVAAAGA VVGDGISYEI GRRYGGAIRN GWVRLGYADA YARGEQFVLR HGMKSIVLAR FLAPLRAVVP VVVGCAMLPR RSFYPVNAVS ALIWAPVHIA PGIVFGASAA LAAAISVRVA AILLVVAALV ALVWFGVRLA LRRGWPLLCQ ATGAAVHASA RRWPRFGAWL HDAIGKVRRL PGAVPVFALL FLGCVWLFAG IVQDVVANDP LTHADIALYA FLQNLRTPPV DATMRALAVL HGHDTGLIVA AAFLVWLMIH RCWVTSAWWL ATLGIAVVLV PAFGAGVPGM SPASLPPGAL HVALPDADAA FAMLASSGIG WVLTRERPAS WRIPVVTAVV LWIVLGGFAR LYVGDTWLSG LLGGWCLGLA WFAVLAGAHA YWRVHEHVQP RGALVAVLVV LATAGVWTVP AQWQLDRAAR PHVGDVVAMT VDQWMRGGWQ RVPTRRTEIG GDREEYLPLQ WCATSDTLDR HLSLAGWQRA TPWSPATALH WLSPQAPAET LPVLPRYTHG ESTRRVFVRV DAAHPDSRLV LRLWRYPYVL QDALGMRPLW YGALYRETLH RPARVMTVVR TTPLDDAATI AQALKVEPTI ERPPAGMSAA PPAMTLVWMV QP
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