Gene Bamb_5326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5326 
Symbol 
ID4314215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2367588 
End bp2368604 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID638153167 
ProductABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 
Protein accessionYP_777207 
Protein GI115360069 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CGCCACGCCG CCGCGCGTTG CTCGCCGCTG GCCTCGGCGC GTTCGCCGCG 
CCGTCGCTGG TGCGCTCGAA GCCGCGCACG GTGCGGATCT CGAAAGGCTA TGGCGTGCTG
TACCTGCCGC TGCTCGTGAT GGAGAAGCAG CGCCTGTTCG AGCGGCACGC GGCGCGCCGT
GGCCTGCGCG ACCTCGCGCT CGACTGGGTG CTGCTCGACG GCGGCAATTC CGTCAACGAC
GCGATGATGG CCGGCACGCT CGACTTCGCG GGCGCCGGCG CGCCGGGCTT CATCGAGCTG
TGGGCGCGGG CGCGCGGGAT TCCGAATGTC GAGGTGATCG GCATCAGCGG CTTGTCGACG
ACGTCGCTGT CGCTCAATGC GAACCGTCCG GGCCTCGCGT CGCTGCGCGA CTTCACGCCG
TCCGACCGGA TCGCGGTGCC GGGCATTCGC ACATCGCTGT CGGCGGTCGT GCTGCAGATG
GTCGCGAGCC GGCAGCTCGG TGCGAAGCAT TTCGCGCAAC TCGATTCGAT CACCGTGAAC
CTGCCGCATC CGCAGGCGAT GCAGGCGCTG ATCCGCCGCG AGAACGGCGT GACGGCGCAC
TTCACGTCGC CGCCGTTCTC GACGCTCGAA TTGCGGCAGC CGGGCATTCA TCGCGTCGTG
AATTCGGTCG ACGTGCTCGG CCCGATGACG CTCGACGTCG TGTTCGCGCC GAAGCGGCTC
GTCGATGCGG AGCCTGCGCT GGCCGCGGCG TTTCTCGGCG CGCTCGACGA AGCGAACCGC
CTGATCGTGC AGGATCCGCG CGCGGCGGCC GCGCTGTATG CGGCGTCGTC GGGTGTCGGC
GTGTCGCACG ACGACGTGAT ACGGATGCTC GCCGCGCCGG ACACGCGGTT CTCGGTGTGG
CCGAACCAGC TGATGGACTA CGTCGAGTTC CTGTACCTCG CCGGCACGAT CAAGGCAAAA
CCGCGCGCGT GGCACGAGAT GTTCGCGCCG ATGCTCGACG ACTACCAGCC ACGCTGA
 
Protein sequence
MTTSPRRRAL LAAGLGAFAA PSLVRSKPRT VRISKGYGVL YLPLLVMEKQ RLFERHAARR 
GLRDLALDWV LLDGGNSVND AMMAGTLDFA GAGAPGFIEL WARARGIPNV EVIGISGLST
TSLSLNANRP GLASLRDFTP SDRIAVPGIR TSLSAVVLQM VASRQLGAKH FAQLDSITVN
LPHPQAMQAL IRRENGVTAH FTSPPFSTLE LRQPGIHRVV NSVDVLGPMT LDVVFAPKRL
VDAEPALAAA FLGALDEANR LIVQDPRAAA ALYAASSGVG VSHDDVIRML AAPDTRFSVW
PNQLMDYVEF LYLAGTIKAK PRAWHEMFAP MLDDYQPR