| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5317 |
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| Symbol | |
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| ID | 4314206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2358735 |
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| End bp | 2359928 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153158 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_777198 |
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| Protein GI | 115360060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.862776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTT CGGGGAACGA CGCACGCGGC GCATGGCGGC GCGTGCTGGG CACGGTGGCG
GCGCTCGCTG CCGCATGGGG CTTGTCGACG GGCGGTGCGC TCGCGGCCGG TGTGTCGGGC
GAGCCGGTGG TGATCGGCGT GAGCGGGCCG CTCACGGGCC AGGACGCGCA GTACGGCGAG
CAATGGAAGC GCGGCTTCGA TCTCGCGCTC GACGAGATCA ACGGCAGCGG CGGCATTCAC
GGCCGGCCGC TCGCAGTCGA CTTCCAGGAC AGCCGCAGCG ACCCGCGTCA GGCCGTCGCG
ATCGCGCAGA AGTTCGTCGC CGATCCGCGC ATCGCGATCG AGCTGGGCGA TTTCTCCAGC
GCGACGTCGA TGGCCGCGTC GCCGATCTAC CAGCGCGGGC AGCTGACCCA GTTCGGCTTC
ACGAACTCGC ATCCGGACTT CACGAAGGGC GGAGACTATC TGTGGAGCAC CGCGCTGAGC
CAGGCCGAGG AGCAGCCGCT GCTCGCACGC TACGCGGTGA AGGAACTCGG CTTCAAGCGG
ATCGCGGTGC TGTACCTGAA CACCGACTGG GGCCGCACCA GCAAGGACAT CTTCGCGAAG
GCGGTGGCCG GGCTCGGCGC GCAGGTCGTC GCGGCCGAAG GCTACCAGCC GACGGAGAAG
GATTTCCGTT CGACGCTCGT GCGGATCGGT GAATCGAAGC CCGATTCGAT CGTGCTGATC
TCGTACTACG CGGACGGCGC GCAAATCGTG CGGCAGGCGC GCACGTCGGG CGTCACGCTG
CCGATCGCGG CGGTTGGCTC CGTGTATTCG CCGAAATTCC TCGAGCTGGG CGGCGCGGCC
GTCGATGGCG TCTATACGGA ATCGAACTTC TTCCCGGCGG AACCGCGCCC CGAGGTGCAG
GCGTTCGTGC AGCGCTATCG CGCGAAATTC CATGCCGATC CCGATTCGTT CGTCGCGCGT
GCGTACGACG CGCTGATCCT GTCGGCCGAG GTGCTGCGCC GCTACGGCAC GACACGCCAG
GCCGCGCACG ACGGCTTCGC GAAAATCAGC GACGTGCCGA GCGTGATCTT CGGCAAGGTG
CGCTTCGATC CGCGGACGCG CCGTGTCGCG GGCGCACGCA CCGTGTATCT GGTCGTGAAG
CAGGGGCAGT GGGCGCTATG GGATGGCGCG AAGCCGCAGC TCGCCGCGCG TTGA
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| Protein sequence | MNVSGNDARG AWRRVLGTVA ALAAAWGLST GGALAAGVSG EPVVIGVSGP LTGQDAQYGE
QWKRGFDLAL DEINGSGGIH GRPLAVDFQD SRSDPRQAVA IAQKFVADPR IAIELGDFSS
ATSMAASPIY QRGQLTQFGF TNSHPDFTKG GDYLWSTALS QAEEQPLLAR YAVKELGFKR
IAVLYLNTDW GRTSKDIFAK AVAGLGAQVV AAEGYQPTEK DFRSTLVRIG ESKPDSIVLI
SYYADGAQIV RQARTSGVTL PIAAVGSVYS PKFLELGGAA VDGVYTESNF FPAEPRPEVQ
AFVQRYRAKF HADPDSFVAR AYDALILSAE VLRRYGTTRQ AAHDGFAKIS DVPSVIFGKV
RFDPRTRRVA GARTVYLVVK QGQWALWDGA KPQLAAR
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