Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5294 |
Symbol | |
ID | 4314183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2335174 |
End bp | 2336313 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638153135 |
Product | major facilitator transporter |
Protein accession | YP_777175 |
Protein GI | 115360037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.264331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG GCGTGTTCGG CCTCGTCACC GCCGAATTCC TGCCCGCGAG TCTGCTCACG CCGATGGCCG ACAGCCTCGG CGTGACCGAA GGCGTGGCCG GCCAGGCCGT CACGGCCACC GCGACCGTCG CGCTCGTCAC GAGCCTGCTG ATCTCCGCGC TGACGCGCAC GATCGACCGC CGGCGTGTGC TGCTCGCGTT CTCCGTGCTG CTCGTCGCCT CGAATCTCGC GGTCGCGTTC GCGCCCGACC TGACGACGTT GCTGATCGGC CGCGTCGTGC TCGGCGTCGC GCTCGGCGGC TTCTGGACGA TGGCGACGGC CACCGCGATG CGGCTCGTGC CGACCGCGAT GGTGCCGCGC GCGCTGTCGA TCATCTTCAG CGGCGTGGCG GTCGCGACGA TCGCGTCGGC GCCGATGGGC AGCTACTTCG GGCACCTGAT CGGCTGGCGC AACGTGTTCC TGATCGCGGC CGGGCTCGGC GGCGTCGCGT TCGTGTCGCA GGTGATGACG CTGCCGTCGA TGCCGCCGAG CGGCACGACG CGGCTGCGCA CGCTCGTCGA CGTGCTGCGC CGGCCGACCG TCGGCCTCGG GATGTTCGCG ACGATCCTCG TGTTCACCGG CCATTTCGCG TTCTTCACGT ATCTGCGGCC GTTCCTCGAA CAGGTCGCCG GCGTCGGCGT GAACGGGCTG TCGGCGATCC TGCTCGGCTA CGGGATCGCG AACTTCGTCG GCACGTCGCT CGCGGGCCGC GTGCTCGAAC ACCGGCTGCG GCCGATGCTG ATCGGGATGC CGGCGCTGAT GGTCGTGCTC GGCATCGCGC TCGTCGCGCT CGGCCGCGCG CCGATGATCG ACGCGGTGCT CGTCGCGTTG TGGGGGATGG CGTTCGGCGG CGTGCCGGTT GCCTGGTCGA CGTGGGTCAC GCGCACCGTG CCCGATGAAG CCGAGAGCGC GGGCGGGCTG ATCGTCGCGG CGATCCAGCT CGCGATCGCG ACGGGCGCGG CGGCCGGCGG CGTCGTGTTC GACGCGAACG GCGCGGGCGG TGTGTTCCTG AGCGCGGCCG CGGTGCTGGC CGTCGCGGTC GCGACAATCG TGACCGGCGT GCCGAAGCGG GTTGGCGTCG CACGGGCGCT GGCCGAGTGA
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Protein sequence | MTLGVFGLVT AEFLPASLLT PMADSLGVTE GVAGQAVTAT ATVALVTSLL ISALTRTIDR RRVLLAFSVL LVASNLAVAF APDLTTLLIG RVVLGVALGG FWTMATATAM RLVPTAMVPR ALSIIFSGVA VATIASAPMG SYFGHLIGWR NVFLIAAGLG GVAFVSQVMT LPSMPPSGTT RLRTLVDVLR RPTVGLGMFA TILVFTGHFA FFTYLRPFLE QVAGVGVNGL SAILLGYGIA NFVGTSLAGR VLEHRLRPML IGMPALMVVL GIALVALGRA PMIDAVLVAL WGMAFGGVPV AWSTWVTRTV PDEAESAGGL IVAAIQLAIA TGAAAGGVVF DANGAGGVFL SAAAVLAVAV ATIVTGVPKR VGVARALAE
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