Gene Bamb_5282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5282 
Symbol 
ID4314171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2319605 
End bp2320378 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID638153123 
Producthypothetical protein 
Protein accessionYP_777163 
Protein GI115360025 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.393918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTT CCGAATTCCG CCAGTCCGTA CGCAGCGGCG CGTTCCGCCA GCCGACCGCC 
GGCCAGTGCG GCCCGTTCGC GCAAGCGAAT CTCGCGATCC TGCCCAACGC GTATGCGCAC
GATTTCCTGC GCTTTTGTCA GGCGAACCCG AAGGCGTGCC CGCTGCTGGG CGTCGGCGAG
CCGGGCGCGT TCCGGCTGGA CGTGCTCGGC GAGGATCTCG ACATCCGCAC CGACGTGCCG
AGCTACAACG TCTACCGCGA CGGCCGCCTG ACCGAGCGGG TCGAATCGCT CGAGGCGCTG
TGGCGCGACG ATTTCGTCGT ATTCGCGATC GGCTGCTCGT TCTCGTTCGA GGACATGCTC
GCGCGTGAAG GCATCGCGCT GCGCCATATC GAAGAGGGTC GCAACGTGCC GATGTACCGC
ACGTCGATCC CGAACCGCCG CGCGGGAATC TTCGGCGGCC AGCTGGTCGT GTCGATGCGG
CCGCTGCGCG GCGCGGACGC GATCCGCGCG GTGCAGATCA CGAGCCGGTT CCCGGGCGTG
CACGGTGCGC CGGTCCATAT CGGCCATCCG CTTGAGTTGG GCATCGCCGA TCTCGGCACG
CCCGATTTCG GCGACGCGGT GACGGTGCGC GACGGCGAGC TGCCGGTGTT CTGGGCGTGC
GGCGTGACGC CGCAAACCGC GCTGATGGAA GCGAAGCTGC CGCTCGCGAT CGCGCATACG
CCCGGCTACA TGCTGATGAC CGACATCACG AACGCGTCGC TGGCCGTGTT CTGA
 
Protein sequence
MTPSEFRQSV RSGAFRQPTA GQCGPFAQAN LAILPNAYAH DFLRFCQANP KACPLLGVGE 
PGAFRLDVLG EDLDIRTDVP SYNVYRDGRL TERVESLEAL WRDDFVVFAI GCSFSFEDML
AREGIALRHI EEGRNVPMYR TSIPNRRAGI FGGQLVVSMR PLRGADAIRA VQITSRFPGV
HGAPVHIGHP LELGIADLGT PDFGDAVTVR DGELPVFWAC GVTPQTALME AKLPLAIAHT
PGYMLMTDIT NASLAVF