| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5255 |
|---|
| Symbol | |
|---|
| ID | 4314145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2294062 |
|---|
| End bp | 2294448 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638153097 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_777137 |
|---|
| Protein GI | 115359999 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.107337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.171715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA TGCTCCCAAA GGAACTGCTG ACTATCGGAG AAGTTTCGCA ACGCACCGGC
GTAAGCGTGC GATCGATCCG TCACTACGAC AAACACGGTT TGCTCGCGTC GGTGCGCGCG
GACAATGGAT ATCGGATGTT CCCCGACAGG GCGGTCACGC AGGTCAAGCA GATCCGGCGC
ATGATCGCGA CCGGTTTCAC CATCGAAGAC ATTCTCGGCT TCCCGGACTG CATGCTTCTG
ATCGAAGGCG CGCGTTCGTG CGACCAGATC ACGGATATCC AGCGGCAACG CCTCGAAGCT
ATCGATCGTC AGATCGCGGA TCTCGAACGA CGTCGCATGA GGCTCATCAA AACCTTGTCA
GAAGGCGCGA TTCCGCCGGT CGAGTGA
|
|---|
| Protein sequence | MDKMLPKELL TIGEVSQRTG VSVRSIRHYD KHGLLASVRA DNGYRMFPDR AVTQVKQIRR
MIATGFTIED ILGFPDCMLL IEGARSCDQI TDIQRQRLEA IDRQIADLER RRMRLIKTLS
EGAIPPVE
|
|---|
| |