| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5234 |
|---|
| Symbol | |
|---|
| ID | 4314124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2273594 |
|---|
| End bp | 2274886 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153076 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_777116 |
|---|
| Protein GI | 115359978 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTG CCGTCGTCGG CGCGGTGCGC GCCGCCGCCA GCCGCTATCG CTGGACCGTC
TGCGCGCTGC TGTTCTTCGC GACCGTCATC AACTACATGG ATCGCCAGAT CCTCGGCCTG
CTCGCGCCGA TGCTCCAGCA CGACATCGGC TGGAGCCAGG TGCAGTACGG CCGCATCGTG
ATGGCGTTTT CGGCGTTCTA CGCGATCGGC CTGCTTTGCT TCGGTCGCAT CGTCGACTGG
CTCGGCACGC GCATCTCGTA TGCGGTCGCG ATGCTGGTGT GGAGCATCGC GGCGATGATG
CACGCGATGG TCGGATCGGT GATGGGCTTC GCGGCGGTGC GCGCGTTGCT CGGGATCGGC
GAGGGCGGCA ACTTCCCGGC CGCGATCAAG ACCACGGCCG AATGGTTTCC GCGCCGCGAG
CGCGCGCTCG CCACCGGCAT CTTCAACTCG GGCGCGAACA TCGGTGCGGT GTTCGCGCCC
GCGATCATCC CGGCGATCGC GGTGGCCTAC GGGTGGCGCG CGGCGTTCGT GATCGTCGGC
GCGATCGGCA TCGTGTGGCT CGCGGTGTGG CTGGTGCTGT ATCGCAAGGC CGACACGCGC
GCACTCGCCG AGGCCTACGA CGAGCCGCGC GACGAAGCCG AAGCGCTCGA CGCGGCGAAC
GTGAACGCCG GTGCGCCACG CTGGGGCGAG CTGATCCGCA AGCGCGAGAC GTGGGCGTTC
CTGATCGGCA AGTTCCTCAC CGACCCGGTG TGGTGGTTCT ATCTGTTCTG GCTGCCGAAG
TGGCTCAACG AGTCGCGCGG GATGGACATG CAGCATATCG GCCTGCCGCT CGTGTGCATC
TATGCGCTGA CGACGATCGG CAGCATCGGC GGCGGCTGGC TGTCGTCGGC GTTGCTGCGC
GCGGGCTGGA GTGTGAACGG CGCGCGCAAG ACGGCGATGC TGATCTGCGC ATGCTGCGTG
CTGCCGATTG CGTTCGTGTC GCAGGTGCAG AACCTGTGGA TCGCGGTGCT GATCGTCGGT
CTCGCCGCGG CCGCGCACCA GGGCTGGTCG GCGAACCTGT TCACGACGGC GTCCGACCTG
TTCCCGCGCC GTGCGGTCGC GTCGGTGGTC GGCATCGGCG GGATGGCGGG CTCGATCGGC
GGCGTGCTGT TCTCGGAAGT GATCGGCCAG GTGCTGCAAC GCACGGGCCA CTACTGGGTG
CTGTTCGCGA TCGGCGCGCT GGCCTACCTG CTCGCGCTGG CGGTCATGCA CGTGCTCACG
CCGAAGATGA AGCCCGCGAA GCTCGACGCG TAA
|
|---|
| Protein sequence | MQSAVVGAVR AAASRYRWTV CALLFFATVI NYMDRQILGL LAPMLQHDIG WSQVQYGRIV
MAFSAFYAIG LLCFGRIVDW LGTRISYAVA MLVWSIAAMM HAMVGSVMGF AAVRALLGIG
EGGNFPAAIK TTAEWFPRRE RALATGIFNS GANIGAVFAP AIIPAIAVAY GWRAAFVIVG
AIGIVWLAVW LVLYRKADTR ALAEAYDEPR DEAEALDAAN VNAGAPRWGE LIRKRETWAF
LIGKFLTDPV WWFYLFWLPK WLNESRGMDM QHIGLPLVCI YALTTIGSIG GGWLSSALLR
AGWSVNGARK TAMLICACCV LPIAFVSQVQ NLWIAVLIVG LAAAAHQGWS ANLFTTASDL
FPRRAVASVV GIGGMAGSIG GVLFSEVIGQ VLQRTGHYWV LFAIGALAYL LALAVMHVLT
PKMKPAKLDA
|
|---|
| |