Gene Bamb_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5218 
Symbol 
ID4314108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2255477 
End bp2255812 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content67% 
IMG OID638153060 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_777100 
Protein GI115359962 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.434864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCA CGCAACTCTG TCGCTTCTCC GAGGTGCCTG ACGGCGGCGC GCGGGTCGTC 
GACGAGGCGG GCATCGGGCA ACCCGTCATC GTCGTGCGGC GTGGGGAGCA GGTGTGGGCG
TACGTGAACC GTTGTCCGCA TTTCTCGGTT CCGCTCGATT TCGTGCCGGG CAACGTTTCC
TGTTACCGGT CGCAGGTGCT GATGTGCGCG CATCACAGTG CGCTGTTCCG GTTCGACGAT
GGTGTGTGCA TCGATGGGCC GTGCTCCGGC GCCGGGCTGG AAGCCGTGGC GGTCGAGGTG
GATTCCGCGG CGTGGGTGGT CTGTCGCGGC GCTTGA
 
Protein sequence
MGATQLCRFS EVPDGGARVV DEAGIGQPVI VVRRGEQVWA YVNRCPHFSV PLDFVPGNVS 
CYRSQVLMCA HHSALFRFDD GVCIDGPCSG AGLEAVAVEV DSAAWVVCRG A