Gene Bamb_5205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5205 
Symbol 
ID4314095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2238479 
End bp2238736 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content62% 
IMG OID638153047 
ProductPAAR repeat-containing protein 
Protein accessionYP_777087 
Protein GI115359949 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.29039e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGAA TTATCCGGGT AGGCGACATG CATACCCACG GCGGCCGGGT CGAATCCGGA 
GCCGGAATCA GCAAGGTCAT GGGGCGCGCG GTCGCGCGCT TTGGCGACGC CTGCTCGTGT
CCGATCCACG GCGCCTGCAC GATTGCAGCA GGCGACCCGG CCTTCAACAT TGAAGGCCAA
GCCGCCGCGT TCGATGGTGA CGAAACGACC TGCGGCGCGA AACTGATTTC TTCACTTCCG
AATTCGGGGC GAATTTGA
 
Protein sequence
MRGIIRVGDM HTHGGRVESG AGISKVMGRA VARFGDACSC PIHGACTIAA GDPAFNIEGQ 
AAAFDGDETT CGAKLISSLP NSGRI