Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5182 |
Symbol | |
ID | 4314073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2210936 |
End bp | 2214142 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153025 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_777065 |
Protein GI | 115359927 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.669903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTGC ACGTGATTCG CTGGTCCGTC CGCAACCGCT TCCTGGTGCT GCTCGCGACC GTTCTGTTCG CGGCGTGGGG TGTCCATGCG CTGCGGCAGA CGCCGCTCGA CGCGCTGCCC GACCTGTCGG ACACGCAGGT CATCGTCAAG GCGTCGTACC CGGGCAAGGC GCCGCAGATC GTCGAGGACC AGGTCACCTA CCCGCTGACG ACGACGCTGC TCGGCGTGCC GGGTGCGAAA ACCGTCCGTG CGTACTCGTC GTTCGGCGAT GCGTTCGTCT ACGTATTGTT CGACGACCAT ACCGACCCGT ACTGGGCACG TTCGCGCGTG CTCGAATACC TGAGCCAGGT GCAGAGCCGG CTGCCCGCGG GCGCGACCGT GTCGCTCGGG CCGGATGCGA CCGGGGTCGG GTGGGTGTAC GAGTACGCGC TTGTCGACCG CACCGGCCGC CACGACCCCG GCCAACTGCG CGCGCTCAAC GACTGGTTCC TGAAATTCGA GCTGAAGGCG GTGCCGGACG TGTCGGAAGT CGCGAGCATC GGGGGGATGG TGCGCCAGTA CCAGATCGTG CTCGATCCGG ACAAGCTGCG TGCGTACGGC ATCACCCAGG CGGCGGTCGC GGACGCGCTC GGCAAGGCGA ACCAGGCATC GGGCGGCTCG GTCGTCGAGC TGGCCGAGTC GGAGTACATG GTGCGTTCGT CCGGCTACCT GCGCACGCTC GACGACTTCC GGCACGTCGT GCTGTGCACC GACGAGGCGG GCACGCCGGT GCTGCTCGGC GACGTCGCGC GCATCCAGGT CGGCCCCGCG ATGCGGCGCG GGATCGCGGA ACTGAACGGC CAGGGCGAGG TGACGGGCGG CGTCGTCGTG ATGCGCTCGG GCAAGAATGC GCTGACGACA ATCGACGCGG TGAAGGCGAA GCTCGCCGCG CTGAAGCGCT CGCTGCCGCC CGGCGTCGAG ATCGTCACGA CCTACGATCG CTCGCAGCTG ATCGAGCGCG CGGTGGACAA CCTCAGGGAC AAGCTGATCG AGGAATTCGT GATCGTCGGG ATCGTCTGTG CGGTGTTCCT GTTCCATCTG CGCAGCGCGT TGGTCGCGAT CCTGGCGCTG CCGCTCGGCG TGCTGACTGC GTTCATCGTG ATGCGTTACC AGGGCGTGAA TGCGAACCTG ATGTCGCTGG GCGGCATCGC GATCGCGATC GGCGCAATGA TCGACGCGGC GATCGTGATG ATCGAGAACG CGCACAAGCA TCTGGAGGCA TACGGCGATG CGCATCCGGG CGAGCCGATC ACGACCGCAC GCCGCTGGGA GTTGGTCGCG ACGTCGGCCG CCGAGGTCGG GCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCG TTCATTCCGG TGTTTTCGCT CGAAGGGCAG GAGGGCAAGC TGTTCGCGCC GCTCGCGTTC ACGAAGACCT ACACGATCGC CGCCGCGGCC GCTCTCTCGG TGACGCTGGT GCCGGTGCTG ATGGGGTATC TCGTGCGCGG CCGCATTCCG CCCGAGCACG CGAACCCGAT CAACCGCGTG CTGATCCGCG TGTACCGGCC GCTGCTCGAA GCGACGCTGC GGCGCCCGTG GTTCGCGATC GGTGTTGCCG TCGTCGCGCT GTTGCTGACG GCCGTGCCGG TGGCGCGGCT CGGCGGCGAG TTCATGCCGC CGCTCGACGA GGGCGACCTG CTGTATATGC CGACCGCATT GCCGGGCATC TCGGCCGACA AGGCGAGCGA GCTGCTGCAG CAGACCGATC GGCTGATCAA GACCGTGCCC GAGGTCGATA CGGTGTTCGG CAAGTCGGGG CGCGCGGATA CGGCGACCGA TCCCGCGCCG CTCGAGATGT TCGAAACGAC GATCCGCTTC AAGCCCCGCA GCGCGTGGCG GCCGGGGATG ACGCCCGAGA AGCTCGTCGA CGAACTCGAT CGCACGGTGA AGGTGCCGGG GCTGTCGAAC GTGTGGGTGC CGCCGATCCG CAACCGGCTC GACATGTTGT CCACCGGCAT CAAGACGCCC GTCGGCGTGA AGATCTCCGG ACCGGACCTG CCGGGGATCG ACGCGATCGC GACGCAGGTC GAGGCGGTGG TGAAGCACGT GCCGGGCGTC ACGTCCGCGC TCGCGGAACG GCTCAATGGC GGACGCTACA TCGACGTCGA CATCGACCGG CTCGCGGCCG CGCGCTACGG GCTGTCGGTG GCCGATATCC AGTCGGTCGT GTCGTCGGCG ATCGGCGGCG AGGACGTCGG CGAGGTGATT GCGGGGCGCG AGCGCTTTCC GATCAACATC CGCTATCCGC GCGAGATTCG CGATTCGCTC GAGAACCTGC GGCAGCTGCC GGTCGTCACC GCGCGGGGCG CGCAGCTTCG TCTCGGCGAC GTTGCACGCG TCGCGATCGC CGACGGGCCG CCGATGATCC GCAGCGAGAA TGCGCGGCTG TCCGGCTACG TGTACGTCGA CATTCGCGGC ACCGATCTGC GCACCGCGGT TCGCGCGATG CAGCAGGCGG TCGCGCAGCA GGTCGCGTTG CCGCCCGGCT ATTCGATCGC ATGGTCGGGC CAGTTCGAAT ATCTCGAGCG CGCGGCGGCA ACGCTGCGCA CCGTGGTGCC GGTGACGCTC GCCGTGATCT TCGTGCTGCT GTTCCTCACG TTCGGCTCGG CAGCCGATGC GCTGCTGCTG ATGTCGACAG TGCCGTTCGC GCTGGTCGGC GGCTTCTGGC TCGTCTGGGC GCTCGGCCAC GCGGTATCGG TCGCGACATC GGTGGGTTTC ATCGCGCTGG CGGGCGTGGC CGCCGAGTTC GGCGTGGTGA TGCTGCTGTA CCTGAAGGGC GCGCTGCGGC GCCGCGTCGA CGCCGGCGAG CCGCTGACCG ATGCCGTGCT GCTCGACGCG ATTCGCGAAG GCGCGGTGCT GCGCGTGCGG CCGAAGGCGA TGACGGTGGC CGTCGTGCTT GCCGGCCTCG TGCCCATCAT GATCGGACAC GGCGCCGGCT CCGAAGTGAT GCAGCGCATC GCCGCGCCGA TGGTCGGCGG CATGGTCACC GCACCGCTGC TGTCGATGTT CGTCATTCCC GCCGCATGGC TTTTGCGACA GCGCCGGCGG GTGCGCAGCG CCAGCCGCCG GCGGCATTCC GATGCAGTTC CTCACGGCAT GAACGTGCCG TCCAACCCCA CTGGAGAATC ACGATGA
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Protein sequence | MIVHVIRWSV RNRFLVLLAT VLFAAWGVHA LRQTPLDALP DLSDTQVIVK ASYPGKAPQI VEDQVTYPLT TTLLGVPGAK TVRAYSSFGD AFVYVLFDDH TDPYWARSRV LEYLSQVQSR LPAGATVSLG PDATGVGWVY EYALVDRTGR HDPGQLRALN DWFLKFELKA VPDVSEVASI GGMVRQYQIV LDPDKLRAYG ITQAAVADAL GKANQASGGS VVELAESEYM VRSSGYLRTL DDFRHVVLCT DEAGTPVLLG DVARIQVGPA MRRGIAELNG QGEVTGGVVV MRSGKNALTT IDAVKAKLAA LKRSLPPGVE IVTTYDRSQL IERAVDNLRD KLIEEFVIVG IVCAVFLFHL RSALVAILAL PLGVLTAFIV MRYQGVNANL MSLGGIAIAI GAMIDAAIVM IENAHKHLEA YGDAHPGEPI TTARRWELVA TSAAEVGPAL FFSLLIITLS FIPVFSLEGQ EGKLFAPLAF TKTYTIAAAA ALSVTLVPVL MGYLVRGRIP PEHANPINRV LIRVYRPLLE ATLRRPWFAI GVAVVALLLT AVPVARLGGE FMPPLDEGDL LYMPTALPGI SADKASELLQ QTDRLIKTVP EVDTVFGKSG RADTATDPAP LEMFETTIRF KPRSAWRPGM TPEKLVDELD RTVKVPGLSN VWVPPIRNRL DMLSTGIKTP VGVKISGPDL PGIDAIATQV EAVVKHVPGV TSALAERLNG GRYIDVDIDR LAAARYGLSV ADIQSVVSSA IGGEDVGEVI AGRERFPINI RYPREIRDSL ENLRQLPVVT ARGAQLRLGD VARVAIADGP PMIRSENARL SGYVYVDIRG TDLRTAVRAM QQAVAQQVAL PPGYSIAWSG QFEYLERAAA TLRTVVPVTL AVIFVLLFLT FGSAADALLL MSTVPFALVG GFWLVWALGH AVSVATSVGF IALAGVAAEF GVVMLLYLKG ALRRRVDAGE PLTDAVLLDA IREGAVLRVR PKAMTVAVVL AGLVPIMIGH GAGSEVMQRI AAPMVGGMVT APLLSMFVIP AAWLLRQRRR VRSASRRRHS DAVPHGMNVP SNPTGESR
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