| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5182 |
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| Symbol | |
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| ID | 4314073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2210936 |
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| End bp | 2214142 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153025 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_777065 |
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| Protein GI | 115359927 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.669903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTGC ACGTGATTCG CTGGTCCGTC CGCAACCGCT TCCTGGTGCT GCTCGCGACC
GTTCTGTTCG CGGCGTGGGG TGTCCATGCG CTGCGGCAGA CGCCGCTCGA CGCGCTGCCC
GACCTGTCGG ACACGCAGGT CATCGTCAAG GCGTCGTACC CGGGCAAGGC GCCGCAGATC
GTCGAGGACC AGGTCACCTA CCCGCTGACG ACGACGCTGC TCGGCGTGCC GGGTGCGAAA
ACCGTCCGTG CGTACTCGTC GTTCGGCGAT GCGTTCGTCT ACGTATTGTT CGACGACCAT
ACCGACCCGT ACTGGGCACG TTCGCGCGTG CTCGAATACC TGAGCCAGGT GCAGAGCCGG
CTGCCCGCGG GCGCGACCGT GTCGCTCGGG CCGGATGCGA CCGGGGTCGG GTGGGTGTAC
GAGTACGCGC TTGTCGACCG CACCGGCCGC CACGACCCCG GCCAACTGCG CGCGCTCAAC
GACTGGTTCC TGAAATTCGA GCTGAAGGCG GTGCCGGACG TGTCGGAAGT CGCGAGCATC
GGGGGGATGG TGCGCCAGTA CCAGATCGTG CTCGATCCGG ACAAGCTGCG TGCGTACGGC
ATCACCCAGG CGGCGGTCGC GGACGCGCTC GGCAAGGCGA ACCAGGCATC GGGCGGCTCG
GTCGTCGAGC TGGCCGAGTC GGAGTACATG GTGCGTTCGT CCGGCTACCT GCGCACGCTC
GACGACTTCC GGCACGTCGT GCTGTGCACC GACGAGGCGG GCACGCCGGT GCTGCTCGGC
GACGTCGCGC GCATCCAGGT CGGCCCCGCG ATGCGGCGCG GGATCGCGGA ACTGAACGGC
CAGGGCGAGG TGACGGGCGG CGTCGTCGTG ATGCGCTCGG GCAAGAATGC GCTGACGACA
ATCGACGCGG TGAAGGCGAA GCTCGCCGCG CTGAAGCGCT CGCTGCCGCC CGGCGTCGAG
ATCGTCACGA CCTACGATCG CTCGCAGCTG ATCGAGCGCG CGGTGGACAA CCTCAGGGAC
AAGCTGATCG AGGAATTCGT GATCGTCGGG ATCGTCTGTG CGGTGTTCCT GTTCCATCTG
CGCAGCGCGT TGGTCGCGAT CCTGGCGCTG CCGCTCGGCG TGCTGACTGC GTTCATCGTG
ATGCGTTACC AGGGCGTGAA TGCGAACCTG ATGTCGCTGG GCGGCATCGC GATCGCGATC
GGCGCAATGA TCGACGCGGC GATCGTGATG ATCGAGAACG CGCACAAGCA TCTGGAGGCA
TACGGCGATG CGCATCCGGG CGAGCCGATC ACGACCGCAC GCCGCTGGGA GTTGGTCGCG
ACGTCGGCCG CCGAGGTCGG GCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCG
TTCATTCCGG TGTTTTCGCT CGAAGGGCAG GAGGGCAAGC TGTTCGCGCC GCTCGCGTTC
ACGAAGACCT ACACGATCGC CGCCGCGGCC GCTCTCTCGG TGACGCTGGT GCCGGTGCTG
ATGGGGTATC TCGTGCGCGG CCGCATTCCG CCCGAGCACG CGAACCCGAT CAACCGCGTG
CTGATCCGCG TGTACCGGCC GCTGCTCGAA GCGACGCTGC GGCGCCCGTG GTTCGCGATC
GGTGTTGCCG TCGTCGCGCT GTTGCTGACG GCCGTGCCGG TGGCGCGGCT CGGCGGCGAG
TTCATGCCGC CGCTCGACGA GGGCGACCTG CTGTATATGC CGACCGCATT GCCGGGCATC
TCGGCCGACA AGGCGAGCGA GCTGCTGCAG CAGACCGATC GGCTGATCAA GACCGTGCCC
GAGGTCGATA CGGTGTTCGG CAAGTCGGGG CGCGCGGATA CGGCGACCGA TCCCGCGCCG
CTCGAGATGT TCGAAACGAC GATCCGCTTC AAGCCCCGCA GCGCGTGGCG GCCGGGGATG
ACGCCCGAGA AGCTCGTCGA CGAACTCGAT CGCACGGTGA AGGTGCCGGG GCTGTCGAAC
GTGTGGGTGC CGCCGATCCG CAACCGGCTC GACATGTTGT CCACCGGCAT CAAGACGCCC
GTCGGCGTGA AGATCTCCGG ACCGGACCTG CCGGGGATCG ACGCGATCGC GACGCAGGTC
GAGGCGGTGG TGAAGCACGT GCCGGGCGTC ACGTCCGCGC TCGCGGAACG GCTCAATGGC
GGACGCTACA TCGACGTCGA CATCGACCGG CTCGCGGCCG CGCGCTACGG GCTGTCGGTG
GCCGATATCC AGTCGGTCGT GTCGTCGGCG ATCGGCGGCG AGGACGTCGG CGAGGTGATT
GCGGGGCGCG AGCGCTTTCC GATCAACATC CGCTATCCGC GCGAGATTCG CGATTCGCTC
GAGAACCTGC GGCAGCTGCC GGTCGTCACC GCGCGGGGCG CGCAGCTTCG TCTCGGCGAC
GTTGCACGCG TCGCGATCGC CGACGGGCCG CCGATGATCC GCAGCGAGAA TGCGCGGCTG
TCCGGCTACG TGTACGTCGA CATTCGCGGC ACCGATCTGC GCACCGCGGT TCGCGCGATG
CAGCAGGCGG TCGCGCAGCA GGTCGCGTTG CCGCCCGGCT ATTCGATCGC ATGGTCGGGC
CAGTTCGAAT ATCTCGAGCG CGCGGCGGCA ACGCTGCGCA CCGTGGTGCC GGTGACGCTC
GCCGTGATCT TCGTGCTGCT GTTCCTCACG TTCGGCTCGG CAGCCGATGC GCTGCTGCTG
ATGTCGACAG TGCCGTTCGC GCTGGTCGGC GGCTTCTGGC TCGTCTGGGC GCTCGGCCAC
GCGGTATCGG TCGCGACATC GGTGGGTTTC ATCGCGCTGG CGGGCGTGGC CGCCGAGTTC
GGCGTGGTGA TGCTGCTGTA CCTGAAGGGC GCGCTGCGGC GCCGCGTCGA CGCCGGCGAG
CCGCTGACCG ATGCCGTGCT GCTCGACGCG ATTCGCGAAG GCGCGGTGCT GCGCGTGCGG
CCGAAGGCGA TGACGGTGGC CGTCGTGCTT GCCGGCCTCG TGCCCATCAT GATCGGACAC
GGCGCCGGCT CCGAAGTGAT GCAGCGCATC GCCGCGCCGA TGGTCGGCGG CATGGTCACC
GCACCGCTGC TGTCGATGTT CGTCATTCCC GCCGCATGGC TTTTGCGACA GCGCCGGCGG
GTGCGCAGCG CCAGCCGCCG GCGGCATTCC GATGCAGTTC CTCACGGCAT GAACGTGCCG
TCCAACCCCA CTGGAGAATC ACGATGA
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| Protein sequence | MIVHVIRWSV RNRFLVLLAT VLFAAWGVHA LRQTPLDALP DLSDTQVIVK ASYPGKAPQI
VEDQVTYPLT TTLLGVPGAK TVRAYSSFGD AFVYVLFDDH TDPYWARSRV LEYLSQVQSR
LPAGATVSLG PDATGVGWVY EYALVDRTGR HDPGQLRALN DWFLKFELKA VPDVSEVASI
GGMVRQYQIV LDPDKLRAYG ITQAAVADAL GKANQASGGS VVELAESEYM VRSSGYLRTL
DDFRHVVLCT DEAGTPVLLG DVARIQVGPA MRRGIAELNG QGEVTGGVVV MRSGKNALTT
IDAVKAKLAA LKRSLPPGVE IVTTYDRSQL IERAVDNLRD KLIEEFVIVG IVCAVFLFHL
RSALVAILAL PLGVLTAFIV MRYQGVNANL MSLGGIAIAI GAMIDAAIVM IENAHKHLEA
YGDAHPGEPI TTARRWELVA TSAAEVGPAL FFSLLIITLS FIPVFSLEGQ EGKLFAPLAF
TKTYTIAAAA ALSVTLVPVL MGYLVRGRIP PEHANPINRV LIRVYRPLLE ATLRRPWFAI
GVAVVALLLT AVPVARLGGE FMPPLDEGDL LYMPTALPGI SADKASELLQ QTDRLIKTVP
EVDTVFGKSG RADTATDPAP LEMFETTIRF KPRSAWRPGM TPEKLVDELD RTVKVPGLSN
VWVPPIRNRL DMLSTGIKTP VGVKISGPDL PGIDAIATQV EAVVKHVPGV TSALAERLNG
GRYIDVDIDR LAAARYGLSV ADIQSVVSSA IGGEDVGEVI AGRERFPINI RYPREIRDSL
ENLRQLPVVT ARGAQLRLGD VARVAIADGP PMIRSENARL SGYVYVDIRG TDLRTAVRAM
QQAVAQQVAL PPGYSIAWSG QFEYLERAAA TLRTVVPVTL AVIFVLLFLT FGSAADALLL
MSTVPFALVG GFWLVWALGH AVSVATSVGF IALAGVAAEF GVVMLLYLKG ALRRRVDAGE
PLTDAVLLDA IREGAVLRVR PKAMTVAVVL AGLVPIMIGH GAGSEVMQRI AAPMVGGMVT
APLLSMFVIP AAWLLRQRRR VRSASRRRHS DAVPHGMNVP SNPTGESR
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