| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5153 |
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| Symbol | |
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| ID | 4314044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2183660 |
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| End bp | 2186668 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152996 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_777036 |
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| Protein GI | 115359898 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.437111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA AACTGAAAGC GCTGATTGCG AACGCCACCG CCACCGCGGG ACGCAAGCCG
TTCGAGCCGG GGCGCGTGCG CCGGCAGCAG CAATGGCTGC TGTACGCAAG CGGCGCGGCG
ATCACGATGT TCGTGCTGGT GTGCACGGCA CTTGTCGCGC GACTCGACCT GCAGGAATCG
CTTGCGCAGT ACCGATCGGG GTTCCTGATA CGCAAGGCGG AACTGCTGGC GGAGATGGAG
GTGGTCAGGG CCCTCCAGAA TCGCTACGTC GAAAACCTCG AGCTGATCGC CAAGCATGGC
GCGAGCGTGT CGCCCGATAC GCTCGGGCGG TTTGTCGACG ATCACGGCAG GATGGTTGCC
GTCGGCCACG CGGGGCGTGT GGCATTTGCG GCTTTCGCGC TCGCTTCGTC ATCGCAACCG
GAGAAGGCCT ACGCGCCGTT GCTTCTCAAG TTGCTCGCGC AGGGCGAGGT CACGGGCAAC
ATGCCGCCGC AACAGGCCGG CGATCCGGGA ATGGGCGCGT ACATCATCGA TCCGGACGGC
AATTTTGTCA TTGTGACGGG GTACCCGCTG GTCAAGCAGG TGCTGGCGCT GCCGGCCGGC
TTCGACATCA AGGCATTGAT TCGGCAATTG CAACCGCCGC CCGACTTCGT GTCGATGGCG
TCGGCATCGG ATAGCCGGGA GGTTCTGCTC GATCGGCGCG ACGACCCGCT GACCGGACGC
TCGACGCTGC GGTTCGCACA GGCGGTGCGC GATCCGCAGG GCAAGCCGGT CGCATGGTTC
GTCGCGGTCA GCCGGCCGGA GATCGACGAT TTTCTGCGTT CTTCGTCCGC CGGCAAGGAT
TACGCGCTGG TCAGCCCGGC CGGGCAGGTT CTGACCGGCC GCGAGATCGA CCCTGCGCTG
ACGGCCCGTG CGCTCGACTA TGCGCACAAG GCGGGCAGGG AACGGGCGGC TGCCCATCGC
GTCGGCATGA ATATCGTCAT CGGCAACCGG ATGCCGGGGT TCCGCGAGGT GTTGACCGCG
ACCTTCTCGT GGCGCAGCCT GTTCGATGAC ATGGCCGGCC GCCTGGGGGT CGCAATCGGT
CTCGCGCTGC TGGCGATCGG AACGGTGTGG TTCGCGATCG TCATGTTCGA CCGACGCGCG
TTGCGCCCGG CGAACCGTCG TGCAATCCGG CTGATCGAAA GCGAGGCGCT GAACCGCACG
TTGATTCGCA CGGCGCCGGC CGGGCTCATG CTGCTGTCGC TCGCCAACGG CGACACCATG
GTGCGCAACG AGGCCGCGCA GGCCTACGGC GACACCGATG CGGCAGCGTC GCTCGGCAAG
CGCATCTGGC AGGCGTATCA CCGCAGTATC GCGGGCGGCC GGGCGCCGCG CGTCGTCACG
CACGAATTGT CGGTCGACCT CGCCGGCGGC GGGACGACCT ATCTCGCCGC GCATATCGTC
CGTACGCGCT ATCGCGGCGT CGACGTGTTG CTCTGCACGC TGACCGACAT CACCGCGCGC
AAGCAGATGG AAGACAAGCT GCGCGAGGCC CGGGAGGCGG CGGACGATGC GAACAAGGCG
AAGTCGACGT TCCTCGCGAC GATGAGCCAC GAGATCCGCA CGCCGCTGAA CGCGATCGTC
GGCAATCTGG AATTGATGGA ACGCGCGCCG TTGCCGGCCG AGGAGCGGCG ACGCCTGCAG
ACGGTGATGT CGTCGTCGGA TGCGTTGCTG CGCGTGATCA ACGACGTGCT CGATCTGTCG
AAGGTCGAAT CCAATCAGAT GGTGCTGGAA GCCGTGCCGT TCGATTTGCG TGCGGTTGTG
CGCGACGTCG CGGCGATCTT CCATCCGCTG GCCGCGGCCC GGCACCTCGC GCTCGAATGC
AGGATCGACC CGCAACTGGC CGATGGCTAT GTCGGCGACC CGACTCGCCT GCGTCAGATC
GTGTCGAATC TCGTCAGCAA CGCAATCAAG TTCACCGAGC GCGGCAGCGT GACGATCGAG
GCGCGACCGA CGGGCACCGT CGGCCAAGCG CGCGGCGTCG AGGTGGTGGT GCGCGACACC
GGTATCGGCA TCGCGCCGGA GAGCCTGCCG ACGTTGTTCG ACGTGTATGT CCAGACCGAT
GCGTCGATCT ACCGGCGCTT CGGCGGCACG GGGCTCGGAC TGCCGTTGTG CCGGCGCCTC
GCGCGGCTCA TGCATGGCGA CCTGGCGGTC GAAAGCCGGC CGGGCCAGGG CGCGACGTTC
ATCGTGTCGC TGCCGCTGTC CGCCGCCCCG TCCGGATGGC GCGTCGCGTT CGACGAGACG
AAATCCACCG CGTCGTCGTT GCCGGCATAT GCGGACGACG AGACTCCGCT GCGCGTGCTC
GTTGCCGAGG ATCATCCGGC GAGCCGCGCG CTGCTGCGTG ATCAGCTCGA TGCGCTGCAT
TGCGACGCCA TGCTCGTCGC GAACGGTGTC GAAGCGATGC GCGCGTTCTT CGCGCATCCG
TTCGACGTGG TGCTGACCGA TCTCGGCATG CCGGAACTCG ACGGCTTCGC GCTGGCGAAC
TTCCTGCGCG AGCAGGGCGC GAAGGTGCCG GTGATCGCGA TGACCGCGCA TGCGACCGAG
GAGGATCGGC GGCGCTGCGA GCAGACGGGC GTCGCGGAGG TCGTGCTCAA GCCGCTGTCG
ATCGATGCGC TCGACGCGGT GTTGCGGCGC CACGGAGGAC GCGGCGCGGC GGCGTCGCAT
CCGATCGATC GTGCCGACCG GCCGGTGCCG CCCATGACGG ACGAGATACG CGAAAAATTG
CATGCCTCGA CGCTGCACTC GCTGGCGAAG ATCGATGCCG CGTTGCTGCG CGGGGACATC
GCGTGCGTCA GCGGCGAACT GCATTCGATG CGAGGCGGTT TCGCGCTGGC CGGCGACGTG
GGCTCGAGCG ATGCGTGCGC GAAAGGCGAG CGGGTGCTGG CCGCGGGCGG TCTCGATGCG
CTGAAGCTGG AATGGCCGGA GATACGCGTG GCGATGGAGG CCGCGCTGTC GAGATTGGCC
GGCGTCTGA
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| Protein sequence | MPTKLKALIA NATATAGRKP FEPGRVRRQQ QWLLYASGAA ITMFVLVCTA LVARLDLQES
LAQYRSGFLI RKAELLAEME VVRALQNRYV ENLELIAKHG ASVSPDTLGR FVDDHGRMVA
VGHAGRVAFA AFALASSSQP EKAYAPLLLK LLAQGEVTGN MPPQQAGDPG MGAYIIDPDG
NFVIVTGYPL VKQVLALPAG FDIKALIRQL QPPPDFVSMA SASDSREVLL DRRDDPLTGR
STLRFAQAVR DPQGKPVAWF VAVSRPEIDD FLRSSSAGKD YALVSPAGQV LTGREIDPAL
TARALDYAHK AGRERAAAHR VGMNIVIGNR MPGFREVLTA TFSWRSLFDD MAGRLGVAIG
LALLAIGTVW FAIVMFDRRA LRPANRRAIR LIESEALNRT LIRTAPAGLM LLSLANGDTM
VRNEAAQAYG DTDAAASLGK RIWQAYHRSI AGGRAPRVVT HELSVDLAGG GTTYLAAHIV
RTRYRGVDVL LCTLTDITAR KQMEDKLREA REAADDANKA KSTFLATMSH EIRTPLNAIV
GNLELMERAP LPAEERRRLQ TVMSSSDALL RVINDVLDLS KVESNQMVLE AVPFDLRAVV
RDVAAIFHPL AAARHLALEC RIDPQLADGY VGDPTRLRQI VSNLVSNAIK FTERGSVTIE
ARPTGTVGQA RGVEVVVRDT GIGIAPESLP TLFDVYVQTD ASIYRRFGGT GLGLPLCRRL
ARLMHGDLAV ESRPGQGATF IVSLPLSAAP SGWRVAFDET KSTASSLPAY ADDETPLRVL
VAEDHPASRA LLRDQLDALH CDAMLVANGV EAMRAFFAHP FDVVLTDLGM PELDGFALAN
FLREQGAKVP VIAMTAHATE EDRRRCEQTG VAEVVLKPLS IDALDAVLRR HGGRGAAASH
PIDRADRPVP PMTDEIREKL HASTLHSLAK IDAALLRGDI ACVSGELHSM RGGFALAGDV
GSSDACAKGE RVLAAGGLDA LKLEWPEIRV AMEAALSRLA GV
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