| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5140 |
|---|
| Symbol | |
|---|
| ID | 4314031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2169446 |
|---|
| End bp | 2170078 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638152983 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_777023 |
|---|
| Protein GI | 115359885 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TCTCCACGCT CGCACTGTTC TCCGGCGCCT GCCTCGCGCT GACCGTCACA
CCCGGCCCCG ACATGCTGCT GATCGCATCG CGCAGCGTGA GCCAGGGCCG CCGCGCCGGG
TTCGCCACGC TCGCGGGCAT TCAGGCCGGC ACCTACTGCC ATGCACTCGC GGCCGCGCTC
GGGCTGTCGC AGCTCTTCGT CGCGGTGCCG CTCGCCTATG ACGCCGTGCG CTTCGCGGGT
GCCGCCTATC TGCTTTATCT CGCGTGGAAG ACGTTCCGTT CGGATGCGAC CGCGCTGTCG
CCGGTCGCGT CACCGCGCCG CCATTCGACC GCCGCGATCT TCCGCCAGGG CCTGACGACG
AACCTGCTGA ATCCGAAGAT GGCGCTGTTC GTCCTCGCGC TGTTCCCGCA ATTCGTGCGC
CCCGAGCACG GCTCGATCGC CGTGCAGATC CTCATGCTCG CGACGGTGCT CAACCTGATC
GGGCTCGCGG TCAACGGCGC GGTGATCCTG TCCGCGAGCC GGTTGAGCCA GCGAATCGGC
GCGCGCCGCC GGCCGTCGAA GCTGCCGCAG TATCTGCTCG GCACGGTATT CGTCGGGCTC
GCCGCGCGGC TCGCGGTGGC GGGACGGAGT TGA
|
|---|
| Protein sequence | MIDLSTLALF SGACLALTVT PGPDMLLIAS RSVSQGRRAG FATLAGIQAG TYCHALAAAL
GLSQLFVAVP LAYDAVRFAG AAYLLYLAWK TFRSDATALS PVASPRRHST AAIFRQGLTT
NLLNPKMALF VLALFPQFVR PEHGSIAVQI LMLATVLNLI GLAVNGAVIL SASRLSQRIG
ARRRPSKLPQ YLLGTVFVGL AARLAVAGRS
|
|---|
| |