Gene Bamb_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5127 
Symbol 
ID4314018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2159068 
End bp2160105 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID638152970 
Productaldo/keto reductase 
Protein accessionYP_777010 
Protein GI115359872 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.469063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACC GCACGCTCGG CCGCTCCGGC CTCAAGGTTC CCGTACTGAG CTTCGGCGCG 
GGCACGTTCG GCGGCACCGG CCCGTTGTTC GGCGCGTGGG GCAACACGGG CGTCGACGAA
GCGCGCCGCC TGATCGACAT CTGCCTCGAA GCCGGCGTCA ACCTGTTCGA CACGGCCGAC
GTGTATTCCG ACGGCGCCTC CGAGCGCGTG CTCGGCGCCG CGATCCACGG ACGGCGCGAC
CAGGTGCTGA TCTCGACCAA GACGGGCCTG CCGACCGGCG ACGGGCCGAA CGACGCCGGC
ACGTCGCGCT CGCGATTGAT TCGCGCGGTG AACGACGCGT TGCGCCGGCT CGGCACCGAC
TACATCGACC TGCTGCAGCT TCACGCGTTT GACGCGGCCA CGCCGGTGGA GGAAGTGATG
TCGACGCTGG ACGACCTGGT GCGCGCGGGC AAGCTGCGCT ACATCGGCGT ATCGAATTTC
GCCGGCTGGC AAATCATGAA GTCGCTTGCC GCGGCCGACC GGCACGGCTG GTCGCGCTAC
GTCGCGAACC AGGTCTATTA CTCGCTCGTC GGCCGCGACT ACGAGTGGGA CCTGATGCCG
CTCGGCGCGG ACCAGGGCCT CGGCGCGCTG GTATGGAGCC CGCTCGGCTG GGGCCGGCTC
ACCGGCAAGA TCCGCCGCAA CGCGCCGCTG CCCGAAGGCA GCCGCCTGCA CGACACGGCC
GGCTTCGGGC CGCCGGTCGA CGACGAACGG CTGTACGACG TGGTCGATGT GCTCGACGCG
ATCGCGGAGG AAACCGGCAA GACCGTCCCG CAGATCGCGC TGAACTGGCT GCTGCAACGG
CCGACCGTGT CGTCGGTGAT CGTCGGCGCG CGCAACGAGG AACAGCTGCG TCAGAACCTC
GGCGCAGTGG GCTGGTCGCT GACCGACGCG CAAATCGCGA AGCTCGATGC GGCGAGTGCG
GTCGAAGCGC CGTATCCGTA CTTCCCGTAT CGCCGGCAGG ACGCGTTCGC GCGCATCAAT
CCGCCGATGC GCGGTTAA
 
Protein sequence
MEYRTLGRSG LKVPVLSFGA GTFGGTGPLF GAWGNTGVDE ARRLIDICLE AGVNLFDTAD 
VYSDGASERV LGAAIHGRRD QVLISTKTGL PTGDGPNDAG TSRSRLIRAV NDALRRLGTD
YIDLLQLHAF DAATPVEEVM STLDDLVRAG KLRYIGVSNF AGWQIMKSLA AADRHGWSRY
VANQVYYSLV GRDYEWDLMP LGADQGLGAL VWSPLGWGRL TGKIRRNAPL PEGSRLHDTA
GFGPPVDDER LYDVVDVLDA IAEETGKTVP QIALNWLLQR PTVSSVIVGA RNEEQLRQNL
GAVGWSLTDA QIAKLDAASA VEAPYPYFPY RRQDAFARIN PPMRG