Gene Bamb_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5107 
Symbol 
ID4313998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2135200 
End bp2136237 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID638152950 
Productpeptidase M23B 
Protein accessionYP_776990 
Protein GI115359852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.71581e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00235334 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTGCCG GTGCATGTGC GCCGTACATC GTCCTCTGCG ATGCGGCGCG CGATGCGATC 
GAGCGCGATT ACGCGGCGCG CTTCGCGTAC GGTTTTGCGT CGCCGCTTCC GGCAATCGGC
GCTGCGCCGG CGTTCGACGC GCGTCCTGTC GATCTCGCGT CCGCCGAGCC GTTCATGCTC
GCGGAGCAGG AGCACGGCAC GCGAGCCGGC GCGATCACCG GCAGCCTGCG CGCGTCGCTC
GCGCGCGCCG ATCTACCCGC CGACGTCGCC GCGCAGATCA CGCGCATGCT GGCCGGGCGG
ATCGATTCGG CGCAGCGCGG CGCGATGGGC GATACCTTCC GCGTCGCCTT CGAACCGGAC
GACAGCGCAA CCGCGCCGGG CCGCGTGCGC GTGACGGCGC TCGACATCCG CTTTCGCGGC
CAGCGTGTCG CGGCCGTGTG GTTCGCGCCG CAGGCTGGCT CGCCAGGCGC GTACTACGAT
CTCGACGGCA TGCCGCTCGC CGGTGCGCGG TTCGCGATGC CGGTCAACGC AACGCGAATC
AGCTCGCAAT TTGGCGCGCG CGTGCATCCG GTCACGGGCG TCCGGCACGT CCATTCCGGC
GTGGATCTGG CCGCGCCGAC GGGCCGTGCC GTCCACGCGT CGGAGCGCGG GGTCGTGGCT
TTCATCGGCA CCGAGCCGGG CGGCTACGGC AAGTACGTGG TGATTCGGCA CGACGGCGGC
TATGCGTCGT ACTACGCGCA TCTGTCGGCG TTCGAGCCGA CGCTGCGAAC CGGCGCGCGG
GTCGTGCGCG GCCAGCGTGT CGGCGCGGTC GGCAGCACAG GCACCGCGAC CGGCCCGCAT
CTGCACTTCG AGGTGCGGCG ACATGCCCGC CTCGTCGATC CGATCGAACT GGTGCAGGCG
GCCAGGGCGG CGAAACTGAA GGGCGAGCAG CGGGTGGCGT TCAACCGCGT GGCCCGCGCC
GCGCGCACCC AGCTGGCCGC GGCCACGTTG GCGCCGTCGC TCGCGATGTC GCAGCACGGC
GCACCGAGCG ACGGCTGA
 
Protein sequence
MRAGACAPYI VLCDAARDAI ERDYAARFAY GFASPLPAIG AAPAFDARPV DLASAEPFML 
AEQEHGTRAG AITGSLRASL ARADLPADVA AQITRMLAGR IDSAQRGAMG DTFRVAFEPD
DSATAPGRVR VTALDIRFRG QRVAAVWFAP QAGSPGAYYD LDGMPLAGAR FAMPVNATRI
SSQFGARVHP VTGVRHVHSG VDLAAPTGRA VHASERGVVA FIGTEPGGYG KYVVIRHDGG
YASYYAHLSA FEPTLRTGAR VVRGQRVGAV GSTGTATGPH LHFEVRRHAR LVDPIELVQA
ARAAKLKGEQ RVAFNRVARA ARTQLAAATL APSLAMSQHG APSDG