| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5105 |
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| Symbol | |
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| ID | 4313996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2132462 |
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| End bp | 2133607 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152948 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_776988 |
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| Protein GI | 115359850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.140418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00222912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCGAC ATCGGAACAA GACGGCATGC GCAATCGCGG CCGCGCTGGC GTGCGCATGG
TCCGCGCTGC CCGCGCATGC GGACGAGATC GTGCGCATCG GGCACGTCGC GCCGCTGACC
GGTGCGATCG CGCACCTCGG CAAGGACAGC GAGAACGGCG CTCGGCTCGC GGTCGAGGAG
ATCAATGCGA AGGGGCTCGT GATCGGCGGC AGGAAGGTCA CGCTGCAACT CGACGCGCAG
GACGACGCGG GCGACCCGCG CACCGCGACG CAGGTCGCGC AGCGGCTCGT CGACGACAAG
GTGGTCGGCG TCGTCGGCCA TCACAACTCG GGCACGTCGA TTCCGGCGTC GCGCGTCTAT
CGCGACGGCG GCGTCGTGCA GATCTCGCAG GCCGCGACCA ACCCGATGTA CACGCAGCAG
GGCTTCAAGA CGACCTATCG CGTCGTCGCG ACCGATGCGC AGCAAGGGCC CGCGCTGGCG
ATGTATGCGG CGAAGCAGCT GGGCATCAGG ACGGTGGCCG TGGTCGACGA TGCGACCGCG
TACGGGCAGG GCCTCGCGAC CGAGTTCGAG AAGGCGGCGA AATCGGCCGG GATGAAGGTC
ATCTCGCGCG ACGCGACCAA CGACAAGGCG ATCGACTTCC GCGCGATCCT CACGAAGATC
AAGGGCGAGA ACCCCGATGC GATCATGTAC GGCGGGATGG ATGCGACGGG CGGCCCGCTC
GCGAAGCAGG CGCGCCAGCT CGGCCTGCGC GCGAAGATCC TCGCCGGCGA CGGCGTGTGC
TCGCCCGACC TGCCGAAGCT AGCGGGTCCG GCGTCGGACA ATGTCGTGTG TTCGGAAGCC
GGCATCGCGC TCGAGAAGAT GCCGGGCGGC GCGGCGTTCG TGAAGCGTTA CGAAGCGCGT
TACCACCAGC CGATGCAGGT GTACGCGCCG TTCTCGTACG ACGCGGTGTA CATCATCGTC
GACGCGATGC AGCGCGCGAA TTCGACGGAC GCAGCCAAGG TGCTGGCCGC GATGCCGGCG
ACCGACTATC GCGGCGTGAT CGGCGAAACG AGCTTCACGC CGCAGGGCGA CCTGAAGCAC
GGCGCGATCT CGGTGTTCAC GTACAGGAGC GGCAGGAAGG CGCTGCTCGA TATCGTCAGG
ATGTGA
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| Protein sequence | MNRHRNKTAC AIAAALACAW SALPAHADEI VRIGHVAPLT GAIAHLGKDS ENGARLAVEE
INAKGLVIGG RKVTLQLDAQ DDAGDPRTAT QVAQRLVDDK VVGVVGHHNS GTSIPASRVY
RDGGVVQISQ AATNPMYTQQ GFKTTYRVVA TDAQQGPALA MYAAKQLGIR TVAVVDDATA
YGQGLATEFE KAAKSAGMKV ISRDATNDKA IDFRAILTKI KGENPDAIMY GGMDATGGPL
AKQARQLGLR AKILAGDGVC SPDLPKLAGP ASDNVVCSEA GIALEKMPGG AAFVKRYEAR
YHQPMQVYAP FSYDAVYIIV DAMQRANSTD AAKVLAAMPA TDYRGVIGET SFTPQGDLKH
GAISVFTYRS GRKALLDIVR M
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