| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5033 |
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| Symbol | |
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| ID | 4313924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2051979 |
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| End bp | 2052821 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638152876 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_776916 |
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| Protein GI | 115359778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.858524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGA TGCGCAAGCT CGCCGTAGCC GCGATGCTCG GCATTGCCGC GTACAGCGCT
CACGCCGCCA ACGTGCTCGT AGTGTTGTCG GATTCCGATC ACCTCGATCT GAAGGACGGC
AAAGTGTTCG CGACGGGCTT CTACCTGAAC GAACTGATGC AGCCCGTGAA GGCCCTGCTT
GATGCAGGCC ATCAGGTGAC CTTCGCCACG CCCGAGGGGA AGGCGCCGAC GATGGATGCC
ACGTCTGCCG ACAAGATGTA CTTCAACGGC GACGAAAAGG CGATGCGCGA CTACCGGGCT
TTGCTGGACA AGTTGCAGAT CACGTCGCGT GCGCACTCTC CCGTGATCAG TCTGGCGCGG
GTCGAGCAGA TCGGTTACGG CCACTTCGAT GCCGTCTATG TTCCCGGCGG TCATGCGCCG
ATGCAGGATC TTCTGACCAG TCCCGCGGTG GGCAGGCTGC TGGCCGATTT TCATGCGCGC
GGCAAGACCA CGGCGCTCGT TTGCCATGGG CCGATTGCGC TGCTGTCGAC GCTGCCCGAT
GCACCGGGCT TTACACGGCA ACTCGCCGCC GGGAAGGCCG GCGATGGCGC GCCGAAATGG
ATCTATGCCG GTTACCGCAT GACGGTGATC AGCAACGCGG AAGAAGAGCA GGCGAAAGCA
CTGCTCGGCG GCGGCGCGAT GAAGTTCTAT CCGCAGACGG CGTTGCAACG CGCCGGTGGA
ATTTACAGCA GCAACGAGGT GCCCTTTACC GCTCACATGG TGACCGATCG CGAATTGATC
ACAGGCCAGA ACCCGGCGTC CGCACTCGAC GTCGCCGGCC AAATGCTGAA GCGGCTGAAG
TAA
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| Protein sequence | MYSMRKLAVA AMLGIAAYSA HAANVLVVLS DSDHLDLKDG KVFATGFYLN ELMQPVKALL
DAGHQVTFAT PEGKAPTMDA TSADKMYFNG DEKAMRDYRA LLDKLQITSR AHSPVISLAR
VEQIGYGHFD AVYVPGGHAP MQDLLTSPAV GRLLADFHAR GKTTALVCHG PIALLSTLPD
APGFTRQLAA GKAGDGAPKW IYAGYRMTVI SNAEEEQAKA LLGGGAMKFY PQTALQRAGG
IYSSNEVPFT AHMVTDRELI TGQNPASALD VAGQMLKRLK
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