| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5019 |
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| Symbol | |
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| ID | 4313910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2038224 |
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| End bp | 2039606 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152862 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_776902 |
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| Protein GI | 115359764 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.646656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAG ACAGCGCCCG CCTGACCTCC CTCATCTGCG GCACCGAGCC GCTCAACCGG
ATCTGGTCGC CCCGCGCGAC GATCCAGCGG ATGCTCGACG TCGAAGCCGC GCTCGCGCGC
GCGCTCGCCG CGCAGCAGGT GATTCCCGCC ACCGCGGTCG CGCCCATCGA ACGCGCGTGC
GATGCCGATC GGCTCGACGC CGACGCGCTC GCGCATGGCG CGGCGCTCGG CGGCAATCTC
GCGATTCCGC TCGTCAAGCA GCTCACCGCG CAAGTGAAGG CCGACGACCC CGAGGCCGCG
AAGTTCGTGC ACTGGGGCGC GACGAGCCAG GACATCATCG ATACCGCGAC CGTGCTGCAG
CTGCGCGACA CGCTCGACGT GCTCGAGCCG CTGCTCGACG AAGCGTGCGC GTCGCTCGCG
ACGCTCGCGC GCACGCATCG CGCGACACCG ATGATCGGCC GCACGTGGCT GCAGCAGGCG
CTGCCGATCA CGCTCGGCCT GAAATTCGCG CAATGGCTCG ATGCGCTGCT GCGCCATCGC
GCGCGCTTCG CCGAATTGCG CGAGCGCGCG CTGGTGCTGC AGTTCGGCGG CGCGGCCGGC
ACGCTGGCGA GCCTGCGCGA GCATGCGGCC GGCGTGAGCG CCGCGCTCGC GGCCGACCTG
AAGCTCGCGC TGCCGGCCGT GCCGTGGCAT ACGCAGCGCG ACCGCATCGC GGAAGCCGCG
TCGTGCTTCG GGATGCTGAT CGGCACGCTC GGCAAGATTG CGCGTGACGT GTCGCTGCAG
ATGCAGACCG AAGTCGGTGA GCTCGGCGAA CCGGCGGCCG CCGGCAAGGG CGGCTCGTCG
ACGATGCCGC ACAAGCGCAA CCCGGTCGGT TGCGCGGCCG TGCTGACGGC CGCGGTGCGC
GCGCCGAACC TCGTCGCGAC CGTGTTCGCG GGGATGGTCC AGGAGCACGA GCGCGCGCTC
GGCGGCTGGC AGGCCGAATG GGACGCGCTG CCCGACCTCG CGCGCCTGAC CGGCGGCGCG
CTCGCGCAGA TCGCGCAGAT CGTCGCGGGC CTCGACGTGA ACACCGAACG CCTCGCCGCG
AACCTCGACC TGACGCACGG GCTGATCCTC GGCGAAGCCG TGATGCTCGC GCTCGGCGAC
CGGATCGGCC GGCTCGATGC GCACCATGTC GTCGAGCATG CGTCGAAGGA GGCCGTGCGC
ACCGGCGCGA CGCTGTTCGA CGTGCTCGCC GCCGACGCGA CCGTATCGGC CCACCTGTCG
CGCGACGCGC TCGCGCGGCT GCTCGATCCC GCACATTACG TCGGCGAGGC GCAGGCCTAC
GTCGACGCCG TGCTCGCGCT GCACGCCCAG CACGCGAGCC CGAAACAACC AGGAGAACAC
TGA
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| Protein sequence | MLEDSARLTS LICGTEPLNR IWSPRATIQR MLDVEAALAR ALAAQQVIPA TAVAPIERAC
DADRLDADAL AHGAALGGNL AIPLVKQLTA QVKADDPEAA KFVHWGATSQ DIIDTATVLQ
LRDTLDVLEP LLDEACASLA TLARTHRATP MIGRTWLQQA LPITLGLKFA QWLDALLRHR
ARFAELRERA LVLQFGGAAG TLASLREHAA GVSAALAADL KLALPAVPWH TQRDRIAEAA
SCFGMLIGTL GKIARDVSLQ MQTEVGELGE PAAAGKGGSS TMPHKRNPVG CAAVLTAAVR
APNLVATVFA GMVQEHERAL GGWQAEWDAL PDLARLTGGA LAQIAQIVAG LDVNTERLAA
NLDLTHGLIL GEAVMLALGD RIGRLDAHHV VEHASKEAVR TGATLFDVLA ADATVSAHLS
RDALARLLDP AHYVGEAQAY VDAVLALHAQ HASPKQPGEH
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